ggKbase home page

NECEvent2014_5_6_scaffold_89_17

Organism: NECEvent2014_5_6_Enterobacteriales_51_60_partial

partial RP 15 / 55 MC: 1 BSCG 13 / 51 ASCG 7 / 38 MC: 1
Location: 11338..12771

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-54 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 95.2
  • Coverage: 477.0
  • Bit_score: 896
  • Evalue 2.50e-258
RNA polymerase factor sigma-54 n=1 Tax=Enterobacter cloacae RepID=UPI00036743C3 similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 477.0
  • Bit_score: 896
  • Evalue 8.90e-258
  • rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Ent similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 477.0
  • Bit_score: 908
  • Evalue 5.50e-261

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Enterobacter sp. YD4 → Enterobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1434
ATGAAGCAAGGTTTGCAATTAAGGCTCAGCCAACAGCTAGCCATGACGCCACAGTTGCAACAGGCTATTCGCCTGCTGCAACTGTCCACGTTGGAACTTCAGCAAGAACTCCAGCAAGCTCTGGAAAGTAATCCATTGCTTGAGCAAACCGATCTTCACGAAGAAGTGGATGCACAACAATCCCAGGACAACGAAGGGCTGGACACGGTTGACGCTCTTGAGCAAAAAGAGATGCCCGAAGAGTTGCCCCTGGATGCCAGTTGGGACGAAATCTATACCGCCGGCACCCCTTCCGGTAGCAGCACCGATTATCTTGACGATGAACTGCCTATTTACCAGGGAGAGACCACCCAGTCGCTACAGGATTACCTGATGTGGCAGGTGGAACTCACCCCCTTCTCGGATACCGATCGCGCCATTGCGACCTCCATTGTCGACGCTGTTGATGACACGGGTTATCTCACCGTTCCCCTGGAAGACATCCTGGAAAGCATGGGTGATGAAGAGATCGGTCTGGATGAAGTCGAAGCGGTACTGAAACGTATTCAGCGTTTCGATCCGGTCGGTGTTGCGGCCAGGGATCTGCGCGATTGCCTGTTGATCCAACTCTCTCAATTTGCCAAAGAGACCCCCTGGTGCGATGAAGCGCGTTTAATCATCAGCGATCACCTGGATCTGCTCGCTAACCATGACTTCCGTACGCTGATGCGCGTCACACGTCTGAAAGAAGATGTGCTAAAAGAGGCGGTCAATTTAATCCAGTCTCTTGATCCACGCCCTGGCCAGTCAATCCAGACCGGCGAGCCCGAATATGTCATTCCTGACGTGCTGGTGCGCAAGCACAATGGGCGCTGGACGGTCGAGCTGAACTCCGACAGCATTCCACGTTTGCAAATCAACCAGCACTACGCCGCTATGTGCGGTGGGGCGCGTAACGATGCCGACAGCCAGTTTATCCGCAGCAATCTGCAGGAAGCGAAATGGCTGATCAAAAGCCTTGAGAGCCGGAACGATACCCTGTTAAGGGTAAGCCGCTGCATTGTTGAACAGCAGCAGGCGTTTTTCGAGCAAGGCGAAGAATTTATGAAACCGATGGTTCTGGCCGATATCGCTCAGGCCGTCGAGATGCATGAATCAACGATTTCCCGTGTCACGACCCAAAAATATCTGCACAGTCCGCGTGGCATCTTTGAGCTTAAATATTTCTTCTCCAGTCATGTGAATACCGAAGGCGGCGGCGAAGCCTCGTCAACGGCTATCCGTGCGCTGGTGAAGAAATTAATTGCCGCAGAGAATCCTGCGAAGCCGTTGAGTGACAGTAAGCTGACTACCATGCTCTCAGATCAGGGTATTATGGTAGCGCGGCGAACCGTTGCGAAGTATCGAGAGTCTTTATCCATTCCGCCGTCTAATCAGCGCAAACAGCTGGTGTGA
PROTEIN sequence
Length: 478
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDLHEEVDAQQSQDNEGLDTVDALEQKEMPEELPLDASWDEIYTAGTPSGSSTDYLDDELPIYQGETTQSLQDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVPLEDILESMGDEEIGLDEVEAVLKRIQRFDPVGVAARDLRDCLLIQLSQFAKETPWCDEARLIISDHLDLLANHDFRTLMRVTRLKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGRWTVELNSDSIPRLQINQHYAAMCGGARNDADSQFIRSNLQEAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEEFMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAIRALVKKLIAAENPAKPLSDSKLTTMLSDQGIMVARRTVAKYRESLSIPPSNQRKQLV*