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NECEvent2014_5_7_UNK

In projects: NECEvent2014_5_7
Displaying items 51-100 of 332 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_7_scaffold_2084 175_006_scaffold_2084
Order: Enterobacteriales (66.67%)
3 3265 bp 42.88 14.06 40.34
NECEvent2014_5_7_scaffold_2005 175_006_scaffold_2005
Species: Enterococcus faecium (66.67%)
6 3374 bp 32.31 14.00 92.74
NECEvent2014_5_7_scaffold_3086 175_006_scaffold_3086 5 2150 bp 56.00 13.81 30.84
NECEvent2014_5_7_scaffold_4909 175_006_scaffold_4909 1 1331 bp 53.87 13.52 99.85
NECEvent2014_5_7_scaffold_3674 175_006_scaffold_3674
Species: [Clostridium] sordellii (100%)
2 1787 bp 34.30 13.35 75.38
NECEvent2014_5_7_scaffold_2049 175_006_scaffold_2049
Species: Pseudomonas sp. GM55 (66.67%)
3 3305 bp 38.34 11.94 77.97
NECEvent2014_5_7_scaffold_1765 175_006_scaffold_1765 5 3802 bp 51.95 11.56 97.05
NECEvent2014_5_7_scaffold_6002 175_006_scaffold_6002
Order: Enterobacteriales (66.67%)
3 1082 bp 41.40 11.23 53.60
NECEvent2014_5_7_scaffold_1776 175_006_scaffold_1776
Class: Gammaproteobacteria (85.71%)
7 3781 bp 43.51 10.91 71.09
NECEvent2014_5_7_scaffold_5323 175_006_scaffold_5323
Species: Klebsiella pneumoniae (100%)
2 1228 bp 49.35 10.14 68.16
NECEvent2014_5_7_scaffold_1327 175_006_scaffold_1327
Domain: Bacteria (50%)
6 4991 bp 56.24 9.56 96.65
NECEvent2014_5_7_scaffold_3384 175_006_scaffold_3384
Species: Pseudoalteromonas sp. BSi20495 (50%)
2 1956 bp 39.26 9.51 83.74
NECEvent2014_5_7_scaffold_5436 175_006_scaffold_5436
Species: Gemella morbillorum (100%)
1 1204 bp 48.26 9.47 7.72
NECEvent2014_5_7_scaffold_1446 175_006_scaffold_1446
Species: Klebsiella variicola (83.33%)
6 4565 bp 46.07 8.90 70.58
NECEvent2014_5_7_scaffold_1136 175_006_scaffold_1136
Class: Bacilli (85.71%)
7 5872 bp 30.19 8.66 66.93
NECEvent2014_5_7_scaffold_1035 175_006_scaffold_1035
Genus: Klebsiella (50%)
14 6421 bp 47.89 8.64 88.38
NECEvent2014_5_7_scaffold_1488 175_006_scaffold_1488
Genus: Klebsiella (60%)
5 4476 bp 41.64 8.51 91.62
NECEvent2014_5_7_scaffold_2607 175_006_scaffold_2607
Species: [Clostridium] sordellii (100%)
3 2593 bp 30.12 8.50 97.30
NECEvent2014_5_7_scaffold_3353 175_006_scaffold_3353
Genus: Staphylococcus (100%)
3 1974 bp 29.13 8.36 79.03
NECEvent2014_5_7_scaffold_1247 175_006_scaffold_1247
Species: Klebsiella variicola (57.14%)
7 5294 bp 43.33 8.33 60.63
NECEvent2014_5_7_scaffold_4618 175_006_scaffold_4618
Species: Klebsiella oxytoca (100%)
2 1416 bp 48.09 8.16 87.71
NECEvent2014_5_7_scaffold_2405 175_006_scaffold_2405
Species: Klebsiella oxytoca (80%)
5 2815 bp 48.95 8.15 82.38
NECEvent2014_5_7_scaffold_1171 175_006_scaffold_1171
Species: Klebsiella variicola (58.33%)
12 5667 bp 46.50 8.15 83.48
NECEvent2014_5_7_scaffold_3733 175_006_scaffold_3733
Species: Salmonella enterica (100%)
1 1758 bp 47.50 7.94 61.95
NECEvent2014_5_7_scaffold_5225 175_006_scaffold_5225
Species: Klebsiella variicola (100%)
1 1250 bp 49.92 7.92 99.84
NECEvent2014_5_7_scaffold_941 175_006_scaffold_941
Species: Klebsiella variicola (83.33%)
12 7110 bp 48.71 7.78 73.04
NECEvent2014_5_7_scaffold_2393 175_006_scaffold_2393
Species: Escherichia coli (66.67%)
3 2833 bp 48.01 7.62 69.78
NECEvent2014_5_7_scaffold_1453 175_006_scaffold_1453
Genus: Klebsiella (80%)
5 4540 bp 48.70 7.53 79.36
NECEvent2014_5_7_scaffold_3838 175_006_scaffold_3838
Phylum: Firmicutes (80%)
5 1705 bp 39.24 7.21 72.67
NECEvent2014_5_7_scaffold_5427 175_006_scaffold_5427
Species: Staphylococcus epidermidis (66.67%)
3 1206 bp 30.60 7.21 85.82
NECEvent2014_5_7_scaffold_5979 175_006_scaffold_5979 3 1086 bp 64.00 7.18 100.28
NECEvent2014_5_7_scaffold_6150 175_006_scaffold_6150
Species: Pseudomonas aeruginosa (100%)
1 1056 bp 64.11 6.96 67.90
NECEvent2014_5_7_scaffold_3371 175_006_scaffold_3371
Species: [Clostridium] sordellii (100%)
3 1966 bp 26.86 6.94 88.81
NECEvent2014_5_7_scaffold_1944 175_006_scaffold_1944
Order: Enterobacteriales (100%)
5 3484 bp 40.79 6.63 67.51
NECEvent2014_5_7_scaffold_1855 175_006_scaffold_1855
Species: [Clostridium] sordellii (100%)
4 3654 bp 25.53 6.57 92.04
NECEvent2014_5_7_scaffold_1657 175_006_scaffold_1657
Order: Enterobacteriales (100%)
5 4046 bp 47.13 6.52 96.09
NECEvent2014_5_7_scaffold_2198 175_006_scaffold_2198
Species: Lactococcus lactis (66.67%)
3 3104 bp 35.57 6.48 82.35
NECEvent2014_5_7_scaffold_3359 175_006_scaffold_3359
Species: Escherichia coli (83.33%)
6 1972 bp 48.73 6.47 97.97
NECEvent2014_5_7_scaffold_3374 175_006_scaffold_3374
Species: Peptoniphilus lacrimalis (66.67%)
3 1963 bp 29.60 6.42 79.16
NECEvent2014_5_7_scaffold_3244 175_006_scaffold_3244
Species: Staphylococcus sp. DORA_6_22 (50%)
4 2047 bp 26.67 6.38 58.04
NECEvent2014_5_7_scaffold_4960 175_006_scaffold_4960 0 1317 bp 44.50 6.26 0.00
NECEvent2014_5_7_scaffold_6260 175_006_scaffold_6260
Species: Staphylococcus aureus (100%)
1 1033 bp 30.49 6.24 99.61
NECEvent2014_5_7_scaffold_1258 175_006_scaffold_1258
Species: Raoultella ornithinolytica (50%)
2 5234 bp 37.41 6.22 92.45
NECEvent2014_5_7_scaffold_2263 175_006_scaffold_2263
Genus: Staphylococcus (50%)
4 3015 bp 25.47 6.17 55.52
NECEvent2014_5_7_scaffold_3941 175_006_scaffold_3941
Species: Staphylococcus haemolyticus (50%)
2 1657 bp 28.97 6.16 86.90
NECEvent2014_5_7_scaffold_4769 175_006_scaffold_4769
Species: Klebsiella pneumoniae (100%)
2 1371 bp 43.11 6.13 69.80
NECEvent2014_5_7_scaffold_4878 175_006_scaffold_4878 4 1338 bp 59.79 5.94 100.90
NECEvent2014_5_7_scaffold_5345 175_006_scaffold_5345
Species: Peptoniphilus lacrimalis (50%)
2 1223 bp 28.45 5.89 72.36
NECEvent2014_5_7_scaffold_4800 175_006_scaffold_4800
Species: [Clostridium] sordellii (100%)
2 1364 bp 26.32 5.83 98.53
NECEvent2014_5_7_scaffold_3025 175_006_scaffold_3025
Species: Pseudomonas aeruginosa (50%)
2 2195 bp 69.79 5.67 85.15
Displaying items 51-100 of 332 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.