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NECEvent2014_5_7_UNK

In projects: NECEvent2014_5_7
Displaying items 151-200 of 332 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_7_scaffold_2184 175_006_scaffold_2184
Species: Eggerthella sp. HGA1 (50%)
4 3121 bp 67.96 4.13 96.70
NECEvent2014_5_7_scaffold_5600 175_006_scaffold_5600
Species: Staphylococcus epidermidis (100%)
1 1163 bp 32.42 4.13 72.49
NECEvent2014_5_7_scaffold_4278 175_006_scaffold_4278
Species: Clostridium sp. BNL1100 (50%)
2 1526 bp 33.49 4.13 104.59
NECEvent2014_5_7_scaffold_6313 175_006_scaffold_6313
Species: Anaerococcus hydrogenalis (100%)
1 1023 bp 26.49 4.11 99.71
NECEvent2014_5_7_scaffold_4716 175_006_scaffold_4716
Species: [Clostridium] sordellii (100%)
1 1388 bp 22.84 4.11 84.51
NECEvent2014_5_7_scaffold_5230 175_006_scaffold_5230
Species: Staphylococcus epidermidis (100%)
2 1248 bp 31.41 4.09 81.01
NECEvent2014_5_7_scaffold_5714 175_006_scaffold_5714
Species: Staphylococcus epidermidis (100%)
1 1140 bp 33.42 4.08 74.47
NECEvent2014_5_7_scaffold_4678 175_006_scaffold_4678
Genus: Eggerthella (66.67%)
3 1398 bp 63.59 4.08 86.70
NECEvent2014_5_7_scaffold_4221 175_006_scaffold_4221
Species: Veillonella montpellierensis (50%)
2 1546 bp 54.08 4.08 99.55
NECEvent2014_5_7_scaffold_3571 175_006_scaffold_3571
Species: Clostridiales bacterium S5-A11 (50%)
2 1842 bp 41.37 4.07 87.62
NECEvent2014_5_7_scaffold_6226 175_006_scaffold_6226
Species: Clostridiales bacterium S5-A11 (100%)
2 1038 bp 38.15 4.05 41.33
NECEvent2014_5_7_scaffold_6230 175_006_scaffold_6230
Species: Eggerthella lenta (100%)
2 1037 bp 57.96 4.05 96.62
NECEvent2014_5_7_scaffold_5474 175_006_scaffold_5474 3 1194 bp 31.07 4.02 98.24
NECEvent2014_5_7_scaffold_3414 175_006_scaffold_3414
Species: [Clostridium] sordellii (100%)
4 1938 bp 23.68 4.02 80.03
NECEvent2014_5_7_scaffold_6384 175_006_scaffold_6384
Species: Staphylococcus sp. DORA_6_22 (100%)
1 1010 bp 38.02 4.01 99.80
NECEvent2014_5_7_scaffold_6172 175_006_scaffold_6172
Species: Eggerthella sp. HGA1 (100%)
2 1050 bp 55.52 4.00 98.57
NECEvent2014_5_7_scaffold_5764 175_006_scaffold_5764
Species: Staphylococcus epidermidis (100%)
1 1128 bp 34.04 3.99 100.00
NECEvent2014_5_7_scaffold_5749 175_006_scaffold_5749
Species: Staphylococcus epidermidis (100%)
2 1131 bp 35.81 3.98 98.41
NECEvent2014_5_7_scaffold_3750 175_006_scaffold_3750
Phylum: Firmicutes (50%)
4 1748 bp 28.15 3.95 81.87
NECEvent2014_5_7_scaffold_5020 175_006_scaffold_5020
Species: Staphylococcus epidermidis (100%)
2 1301 bp 33.74 3.92 80.71
NECEvent2014_5_7_scaffold_3879 175_006_scaffold_3879
Species: Salmonella enterica (50%)
4 1687 bp 48.31 3.91 85.54
NECEvent2014_5_7_scaffold_4992 175_006_scaffold_4992
Species: Staphylococcus epidermidis (100%)
2 1309 bp 29.87 3.90 77.69
NECEvent2014_5_7_scaffold_4239 175_006_scaffold_4239
Species: Peptoniphilus sp. oral taxon 836 (50%)
2 1541 bp 31.15 3.89 86.44
NECEvent2014_5_7_scaffold_4464 175_006_scaffold_4464
Species: Staphylococcus epidermidis (100%)
2 1470 bp 34.35 3.88 86.94
NECEvent2014_5_7_scaffold_5973 175_006_scaffold_5973
Species: Cronobacter sakazakii (50%)
2 1086 bp 48.16 3.87 86.19
NECEvent2014_5_7_scaffold_3513 175_006_scaffold_3513
Species: [Clostridium] sordellii (100%)
3 1870 bp 26.15 3.85 76.52
NECEvent2014_5_7_scaffold_4923 175_006_scaffold_4923
Species: Staphylococcus epidermidis (100%)
2 1328 bp 34.19 3.84 96.46
NECEvent2014_5_7_scaffold_4631 175_006_scaffold_4631
Species: Veillonella atypica (50%)
2 1412 bp 52.62 3.82 98.58
NECEvent2014_5_7_scaffold_5198 175_006_scaffold_5198
Species: Eggerthella sp. HGA1 (66.67%)
3 1257 bp 47.73 3.82 65.63
NECEvent2014_5_7_scaffold_5210 175_006_scaffold_5210 5 1255 bp 24.54 3.82 79.84
NECEvent2014_5_7_scaffold_3488 175_006_scaffold_3488
Species: Eggerthella sp. HGA1 (50%)
2 1888 bp 61.55 3.81 93.27
NECEvent2014_5_7_scaffold_3607 175_006_scaffold_3607
Species: Staphylococcus epidermidis (66.67%)
3 1824 bp 29.39 3.78 88.65
NECEvent2014_5_7_scaffold_6257 175_006_scaffold_6257
Species: Staphylococcus epidermidis (100%)
1 1033 bp 43.47 3.78 99.90
NECEvent2014_5_7_scaffold_6234 175_006_scaffold_6234
Species: [Clostridium] sordellii (100%)
1 1036 bp 35.91 3.76 99.90
NECEvent2014_5_7_scaffold_6220 175_006_scaffold_6220
Species: human gut metagenome (100%)
1 1039 bp 31.28 3.75 55.15
NECEvent2014_5_7_scaffold_6222 175_006_scaffold_6222
Species: Eggerthella lenta (50%)
2 1039 bp 64.20 3.75 84.89
NECEvent2014_5_7_scaffold_4066 175_006_scaffold_4066
Species: Eggerthella sp. HGA1 (75%)
4 1607 bp 60.86 3.73 91.85
NECEvent2014_5_7_scaffold_5249 175_006_scaffold_5249
Species: Staphylococcus epidermidis (100%)
1 1245 bp 37.11 3.73 99.76
NECEvent2014_5_7_scaffold_5408 175_006_scaffold_5408
Species: Clostridium botulinum (50%)
2 1209 bp 27.63 3.72 88.34
NECEvent2014_5_7_scaffold_4213 175_006_scaffold_4213
Species: Gallibacterium anatis (50%)
2 1548 bp 62.92 3.68 98.64
NECEvent2014_5_7_scaffold_3999 175_006_scaffold_3999
Species: Sporomusa ovata (50%)
2 1633 bp 52.11 3.67 99.39
NECEvent2014_5_7_scaffold_4966 175_006_scaffold_4966
Species: Staphylococcus sp. DORA_6_22 (50%)
2 1316 bp 27.43 3.65 79.79
NECEvent2014_5_7_scaffold_5649 175_006_scaffold_5649
Species: Eggerthella sp. HGA1 (50%)
2 1154 bp 61.18 3.64 80.33
NECEvent2014_5_7_scaffold_4659 175_006_scaffold_4659
Species: Eggerthella sp. HGA1 (100%)
2 1404 bp 59.47 3.63 97.86
NECEvent2014_5_7_scaffold_5257 175_006_scaffold_5257
Phylum: Firmicutes (66.67%)
3 1243 bp 32.50 3.62 62.27
NECEvent2014_5_7_scaffold_3759 175_006_scaffold_3759
Species: [Clostridium] sordellii (100%)
3 1746 bp 27.66 3.61 87.11
NECEvent2014_5_7_scaffold_4237 175_006_scaffold_4237
Species: Staphylococcus epidermidis (66.67%)
3 1542 bp 34.57 3.60 99.03
NECEvent2014_5_7_scaffold_5975 175_006_scaffold_5975
Species: Anaerococcus prevotii (100%)
2 1086 bp 27.44 3.59 90.88
NECEvent2014_5_7_scaffold_3912 175_006_scaffold_3912
Species: Eggerthella sp. HGA1 (100%)
3 1671 bp 61.58 3.59 89.05
NECEvent2014_5_7_scaffold_3566 175_006_scaffold_3566
Species: Eggerthella sp. HGA1 (66.67%)
3 1845 bp 66.07 3.58 91.54
Displaying items 151-200 of 332 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.