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NECEvent2014_5_7_scaffold_188

Alias: 175_006_scaffold_188

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_7_scaffold_188_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

202..639
DNA (438bp) protein (146aa)
UPF0735 ACT domain-containing protein CPE1414 n=8 Tax=Clostridium perfringens RepID=Y1414_CLOPE
hypothetical protein
UPF0735 ACT domain-containing protein CPC_1650 {ECO:0000256|HAMAP-Rule:MF_00707}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
NECEvent2014_5_7_scaffold_188_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

813..1967
DNA (1155bp) protein (385aa)
DegV family protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V5W0_CLOPF rbh
DegV family protein {ECO:0000313|EMBL:EDT70800.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.
class V aminotransferase
NECEvent2014_5_7_scaffold_188_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1955..3112
DNA (1158bp) protein (386aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein T
Probable tRNA sulfurtransferase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R6R0_CLOPF rbh
thiI; thiamine biosynthesis protein ThiI
NECEvent2014_5_7_scaffold_188_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3241..3498
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R6Q9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT24079.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
hypothetical protein
NECEvent2014_5_7_scaffold_188_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3818..4798)
DNA (981bp) protein (327aa)
Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RPN6_CLOPF rbh
RnfABCDGE type electron transport complex subunit D
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfri
NECEvent2014_5_7_scaffold_188_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4812..6122)
DNA (1311bp) protein (437aa)
Electron transport complex, rnfabcdge type, C subunit n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CRU9_CLOPF rbh
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfri
RnfABCDGE type electron transport complex subunit C
NECEvent2014_5_7_scaffold_188_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6385..7956
DNA (1572bp) protein (524aa)
Voltage-gated chloride channel family protein n=4 Tax=Clostridium perfringens RepID=Q0TQI9_CLOP1 rbh
voltage-gated chloride channel family protein
Voltage-gated chloride channel family protein {ECO:0000313|EMBL:EDS78801.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium p
NECEvent2014_5_7_scaffold_188_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8083..8661)
DNA (579bp) protein (193aa)
Flavoredoxin n=9 Tax=Clostridium perfringens RepID=Q0TQJ0_CLOP1 rbh
flavoredoxin
Putative flavin reductase {ECO:0000313|EMBL:ABG85415.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain S
NECEvent2014_5_7_scaffold_188_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8819..9544
DNA (726bp) protein (242aa)
Putative N-acetylmuramoyl-L-alanine amidase n=2 Tax=Clostridium perfringens RepID=B1R6Q4_CLOPF rbh
Putative N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDT24057.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
N-acetylmuramoyl-L-alanine amidase
NECEvent2014_5_7_scaffold_188_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9569..10747)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R6Q3_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT24086.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_5_7_scaffold_188_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10917..11186
DNA (270bp) protein (90aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CWD7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25530.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_5_7_scaffold_188_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11561..14482
DNA (2922bp) protein (974aa)
Putative peptidase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TQJ3_CLOP1 rbh
peptidase
Putative peptidase {ECO:0000313|EMBL:EDT24078.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626
NECEvent2014_5_7_scaffold_188_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14729..15637
DNA (909bp) protein (303aa)
Exonuclease family protein n=3 Tax=Clostridium perfringens RepID=Q0TQJ4_CLOP1 rbh
DNA polymerase III subunit epsilon
Exonuclease family protein {ECO:0000313|EMBL:EDT24022.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. A
NECEvent2014_5_7_scaffold_188_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15821..16165
DNA (345bp) protein (115aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1R6P9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25531.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_5_7_scaffold_188_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16176..17450
DNA (1275bp) protein (425aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R6P8_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT24045.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_5_7_scaffold_188_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17505..18212)
DNA (708bp) protein (236aa)
deoD; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=451756 species="Bacteria
Purine nucleoside phosphorylase DeoD-type n=2 Tax=Clostridium perfringens RepID=DEOD_CLOP1 rbh
NECEvent2014_5_7_scaffold_188_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18406..18669
DNA (264bp) protein (88aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CWD1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14897.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_5_7_scaffold_188_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18708..20294)
DNA (1587bp) protein (529aa)
DEAD-box ATP dependent DNA helicase n=5 Tax=Clostridium perfringens RepID=H7CWD0_CLOPF rbh
DEAD-box ATP dependent DNA helicase {ECO:0000313|EMBL:EIA17083.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
DEAD-box ATP dependent DNA helicase
NECEvent2014_5_7_scaffold_188_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20499..21290
DNA (792bp) protein (264aa)
AP endonuclease, family 2 n=2 Tax=Clostridium perfringens RepID=B1RKP1_CLOPF rbh
AP endonuclease, family 2 {ECO:0000313|EMBL:EDT25472.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str.
AP endonuclease
NECEvent2014_5_7_scaffold_188_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21414..22700
DNA (1287bp) protein (429aa)
tig; trigger factor (EC:5.2.1.8)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
Trigger factor n=9 Tax=Clostridium perfringens RepID=TIG_CLOP1 rbh
NECEvent2014_5_7_scaffold_188_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22891..23475
DNA (585bp) protein (195aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000255|HAMAP-Rule:MF_00444}; EC=3.4.21.92 {ECO:0000255|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000255|HAMAP-Rule:MF_00444}; TaxID=195102 spe
ATP-dependent Clp protease proteolytic subunit n=11 Tax=Clostridium perfringens RepID=CLPP_CLOP1 rbh
NECEvent2014_5_7_scaffold_188_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23515..24822
DNA (1308bp) protein (436aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=9 Tax=Clostridium perfringens RepID=CLPX_CLOP1 rbh
clpX; ATP-dependent protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac
NECEvent2014_5_7_scaffold_188_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24933..26645
DNA (1713bp) protein (571aa)
ATP-dependent protease LonB n=4 Tax=Clostridium perfringens RepID=H7CWC5_CLOPF rbh
ATP-dependent protease LonB {ECO:0000313|EMBL:EIA17078.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
lonB; ATP-dependent protease LonB
NECEvent2014_5_7_scaffold_188_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26767..29097
DNA (2331bp) protein (777aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
lon; ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=3 Tax=Clostridium perfringens RepID=Q0TQK5_CLOP1 rbh
NECEvent2014_5_7_scaffold_188_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29097..29690
DNA (594bp) protein (198aa)
Probable GTP-binding protein EngB n=8 Tax=Clostridium perfringens RepID=ENGB_CLOP1 rbh
engB; ribosome biogenesis GTP-binding protein YsxC
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_5_7_scaffold_188_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29907..30389
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RC77_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT22169.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_5_7_scaffold_188_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30425..30640
DNA (216bp) protein (72aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CWC1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25473.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_5_7_scaffold_188_28
unknown

Not on your lists

30606..30809
DNA (204bp) protein (68aa)

This feature has no annotations

NECEvent2014_5_7_scaffold_188_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31005..31574
DNA (570bp) protein (190aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XKK9_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81091.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_5_7_scaffold_188_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31714..32637)
DNA (924bp) protein (308aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TQL2_CLOP1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81090.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
Displaying items 1-30 of 40 in total

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