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NECEvent2014_5_7_scaffold_366

Alias: 175_006_scaffold_366

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_7_scaffold_366_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(648..1118)
DNA (471bp) protein (157aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CYW0_CLOPF rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA16026.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_5_7_scaffold_366_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1242..1565
DNA (324bp) protein (108aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XI63_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81964.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_5_7_scaffold_366_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1602..3590)
DNA (1989bp) protein (663aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=451755 species="Bacteria
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2)
DNA ligase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BQR7_CLOPF rbh
NECEvent2014_5_7_scaffold_366_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3628..5883)
DNA (2256bp) protein (752aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
pcrA; ATP-dependent DNA helicase PcrA (EC:3.6.1.-)
ATP-dependent DNA helicase PcrA n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RPH1_CLOPF rbh
NECEvent2014_5_7_scaffold_366_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6095..6883)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XI60_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81967.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_5_7_scaffold_366_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6900..7448)
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XI59_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81968.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_5_7_scaffold_366_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7450..8121)
DNA (672bp) protein (224aa)
Gram positive anchor protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3A3_CLOPF rbh
Gram positive anchor protein {ECO:0000313|EMBL:EDT71695.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str.
anchor protein
NECEvent2014_5_7_scaffold_366_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8674..9393)
DNA (720bp) protein (240aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
Pseudouridine synthase n=7 Tax=Clostridium perfringens RepID=H7CYW7_CLOPF rbh
16S pseudouridylate synthase
NECEvent2014_5_7_scaffold_366_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9767..11827)
DNA (2061bp) protein (687aa)
Two component regulator three Y motif protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BQS3_CLOPF rbh
Two component regulator three Y motif protein {ECO:0000313|EMBL:EDT16040.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium p
triple tyrosine motif-containing protein
NECEvent2014_5_7_scaffold_366_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12221..12670)
DNA (450bp) protein (150aa)
UPF0178 protein CPE2266 n=6 Tax=Clostridium perfringens RepID=Y2266_CLOPE rbh
hypothetical protein
UPF0178 protein CPC_2571 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str.
NECEvent2014_5_7_scaffold_366_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12803..14155)
DNA (1353bp) protein (451aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|R
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RA44_CLOPF rbh
NECEvent2014_5_7_scaffold_366_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14185..14394)
DNA (210bp) protein (70aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CYX1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27449.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_5_7_scaffold_366_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14596..15564)
DNA (969bp) protein (323aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=6 Tax=Clostridium perfringens RepID=Q0TN49_CLOP1 rbh
oligopeptide/dipeptide ABC transporter ATP-binding protein
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT27483.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
NECEvent2014_5_7_scaffold_366_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15565..16542)
DNA (978bp) protein (326aa)
Oligopeptide ABC transporter ATPase n=8 Tax=Clostridium perfringens RepID=H7CYX3_CLOPF rbh
oligopeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT15977.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
NECEvent2014_5_7_scaffold_366_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16556..17470)
DNA (915bp) protein (305aa)
Oligopeptide ABC transporter permease component n=10 Tax=Clostridium perfringens RepID=H7CYX4_CLOPF rbh
oligopeptide ABC transporter permease component
Oligopeptide/dipeptide ABC transporter, permease protein {ECO:0000313|EMBL:EDT71713.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
NECEvent2014_5_7_scaffold_366_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17485..18450)
DNA (966bp) protein (322aa)
Oligopeptide/dipeptide ABC transporter, permease protein n=9 Tax=Clostridium perfringens RepID=Q0TN46_CLOP1 rbh
oligopeptide/dipeptide ABC transporter permease
Oligopeptide/dipeptide ABC transporter, permease protein {ECO:0000313|EMBL:EDT27385.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
NECEvent2014_5_7_scaffold_366_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18525..20267)
DNA (1743bp) protein (581aa)
Oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein n=1 Tax=Clostridium perfringens F262 RepID=H7CYX6_CLOPF rbh
Oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein {ECO:0000313|EMBL:EIA16042.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
oligopeptide/dipeptide ABC transporter oligopeptide/dipeptide-binding protein
Displaying 17 items

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