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NECEvent2014_5_7_scaffold_378

Alias: 175_006_scaffold_378

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_7_scaffold_378_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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165..1187
DNA (1023bp) protein (341aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRN5_CLOP1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT70575.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
NECEvent2014_5_7_scaffold_378_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1319..2941
DNA (1623bp) protein (541aa)
aspD; aspartate aminotransferase (EC:2.6.1.1)
L-aspartate beta-decarboxylase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRN6_CLOP1 rbh
L-aspartate beta-decarboxylase {ECO:0000313|EMBL:EDT70581.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D st
NECEvent2014_5_7_scaffold_378_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3034..3648)
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RRN1_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17416.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_5_7_scaffold_378_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3876..4031)
DNA (156bp) protein (52aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CV61_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17415.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_5_7_scaffold_378_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4207..5865)
DNA (1659bp) protein (553aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000255|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00022}; Short=GluRS {ECO:0000255|HAMAP-Rul
Glutamate--tRNA ligase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=SYE_CLOP1 rbh
NECEvent2014_5_7_scaffold_378_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6532..8208)
DNA (1677bp) protein (559aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRP0_CLOP1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT22430.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_5_7_scaffold_378_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8224..8895)
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRP1_CLOP1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26718.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_5_7_scaffold_378_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9214..10248)
DNA (1035bp) protein (345aa)
Aminopeptidase n=3 Tax=Clostridium perfringens RepID=H7CV57_CLOPF rbh
aminopeptidase
Aminopeptidase {ECO:0000313|EMBL:EIA17411.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_5_7_scaffold_378_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10392..11303
DNA (912bp) protein (304aa)
Radical SAM domain-containing protein n=2 Tax=Clostridium perfringens RepID=H7CV56_CLOPF rbh
radical SAM domain-containing protein
Radical SAM domain-containing protein {ECO:0000313|EMBL:EIA17410.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_5_7_scaffold_378_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11360..12070)
DNA (711bp) protein (237aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRP4_CLOP1 rbh
Crp/FNR family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EDT71938.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfr
NECEvent2014_5_7_scaffold_378_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12271..13338
DNA (1068bp) protein (356aa)
Oxidoreductase, 2-nitropropane dioxygenase family n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRP5_CLOP1 rbh
2-nitropropane dioxygenase
Oxidoreductase, 2-nitropropane dioxygenase family {ECO:0000313|EMBL:EDT71950.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
NECEvent2014_5_7_scaffold_378_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13405..14151)
DNA (747bp) protein (249aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRP6_CLOP1 rbh
NECEvent2014_5_7_scaffold_378_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14358..15092
DNA (735bp) protein (245aa)
PP-loop family protein n=6 Tax=Clostridium perfringens RepID=Q0SU26_CLOPS rbh
exoenzyme S synthesis protein B
ExsB family protein {ECO:0000313|EMBL:EDT13328.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.
NECEvent2014_5_7_scaffold_378_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15160..16038)
DNA (879bp) protein (293aa)
sdhA; L-serine dehydratase, iron-sulfur-dependent subunit alpha (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EDT26765.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EDT26765.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridia
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRP8_CLOP1 rbh
NECEvent2014_5_7_scaffold_378_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16042..16722)
DNA (681bp) protein (227aa)
sdhB; L-serine dehydratase, iron-sulfur-dependent subunit beta (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRP9_CLOP1 rbh
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:EIA17404.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
NECEvent2014_5_7_scaffold_378_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16754..17821)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CV49_CLOPF rbh
hypothetical protein
Probable regulatory protein {ECO:0000313|EMBL:BAB80693.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain
NECEvent2014_5_7_scaffold_378_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18045..19916)
DNA (1872bp) protein (624aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
Sensory box histidine kinase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRQ1_CLOP1 rbh
sensory box histidine kinase
Displaying 17 items

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