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NECEvent2014_5_7_scaffold_565

Alias: 175_006_scaffold_565

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_7_scaffold_565_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(89..568)
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rR
Ribosomal RNA large subunit methyltransferase H 1 n=8 Tax=Clostridium perfringens RepID=RLMH1_CLOPS rbh
rRNA large subunit methyltransferase
NECEvent2014_5_7_scaffold_565_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(815..1186)
DNA (372bp) protein (124aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CZW0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA15735.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_5_7_scaffold_565_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1415..2056)
DNA (642bp) protein (214aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CZW1_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT24315.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_5_7_scaffold_565_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2163..2663)
DNA (501bp) protein (167aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CZW2_CLOPF rbh
hypothetical protein
SEC-C domain protein {ECO:0000313|EMBL:EDS81720.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495
NECEvent2014_5_7_scaffold_565_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2807..3361)
DNA (555bp) protein (185aa)
Putative lipoprotein n=8 Tax=Clostridium perfringens RepID=H7CZW3_CLOPF rbh
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:EDT13674.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987
NECEvent2014_5_7_scaffold_565_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3377..4168)
DNA (792bp) protein (264aa)
Metallo-beta-lactamase family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TM44_CLOP1 rbh
metallo-beta-lactamase
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:EDS81712.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_5_7_scaffold_565_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4191..5444)
DNA (1254bp) protein (418aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 n=9 Tax=Clostridium perfringens RepID=MURA2_CLOPE rbh
NECEvent2014_5_7_scaffold_565_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5784..6329
DNA (546bp) protein (182aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XH78_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82313.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_5_7_scaffold_565_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6524..7003
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CZW7_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA15742.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_5_7_scaffold_565_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7059..7490
DNA (432bp) protein (144aa)
Putative membrane protein n=2 Tax=Clostridium perfringens RepID=B1R6C2_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT24255.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. AT
hypothetical protein
NECEvent2014_5_7_scaffold_565_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7557..8753
DNA (1197bp) protein (399aa)
Subtilase family protein n=3 Tax=Clostridium perfringens RepID=Q0TM39_CLOP1 rbh
subtilase
Subtilase family protein {ECO:0000313|EMBL:EDT13659.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS
NECEvent2014_5_7_scaffold_565_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8756..9808)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XH74_CLOPE rbh
M23/M37 family peptidase
Uncharacterized protein {ECO:0000313|EMBL:BAB82317.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_5_7_scaffold_565_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10050..11039
DNA (990bp) protein (330aa)
DnaD and phage-associated domain-containing protein n=10 Tax=Clostridium perfringens RepID=H1CVU2_CLOPF rbh
DNA replication protein DnaD
Putative DNA replication protein DnaD {ECO:0000313|EMBL:EDT25797.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_5_7_scaffold_565_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11036..12031
DNA (996bp) protein (332aa)
Putative DNA replication protein DnaC n=4 Tax=Clostridium perfringens RepID=Q0TM36_CLOP1 rbh
DNA replication protein DnaC
Putative DNA replication protein DnaC {ECO:0000313|EMBL:EDT24231.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_5_7_scaffold_565_trna_3
unknown

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comp(12126..12198)
DNA (73bp)
transferRNA
NECEvent2014_5_7_scaffold_565_trna_2
unknown

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comp(12205..12278)
DNA (74bp)
transferRNA
NECEvent2014_5_7_scaffold_565_trna_1
unknown

Not on your lists

comp(12293..12365)
DNA (73bp)
transferRNA
Displaying 17 items

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