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NECEvent2014_5_7_scaffold_109

Alias: 175_006_scaffold_109

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_7_scaffold_109_1
Clostridium paraputrificum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..1201
DNA (1200bp) protein (400aa)
Chitinase B {ECO:0000313|EMBL:BAA23796.1}; EC=3.2.1.14 {ECO:0000313|EMBL:BAA23796.1};; TaxID=29363 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
Chitinase B n=1 Tax=Clostridium paraputrificum RepID=O50076_9CLOT
carbohydrate binding domain protein
NECEvent2014_5_7_scaffold_109_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1383..2654
DNA (1272bp) protein (424aa)
symporter n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A011B rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99002.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
dicarboxylate symporter family protein
NECEvent2014_5_7_scaffold_109_3
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2778..3509
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2PPS3_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK28435.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
ABC transporter family protein
NECEvent2014_5_7_scaffold_109_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3502..4692
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIB6_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99368.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ABC-2 type transporter family protein
NECEvent2014_5_7_scaffold_109_5
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4783..5265)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FNP5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB14868.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
NECEvent2014_5_7_scaffold_109_6
Campylobacter showae, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5318..5728)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Campylobacter showae CSUNSWCD RepID=M5IL88_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKU11915.1}; TaxID=1244083 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campyloba
hypothetical protein
NECEvent2014_5_7_scaffold_109_7
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5855..7297
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FP16_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDB14963.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
deoxyguanosinetriphosphate triphosphohydrolase
NECEvent2014_5_7_scaffold_109_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7445..9217
DNA (1773bp) protein (591aa)
Oligoendopeptidase F n=2 Tax=Clostridium botulinum B RepID=B2TMP2_CLOBB rbh
Oligoendopeptidase, pepF/M3 family protein {ECO:0000313|EMBL:AIY81706.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bot
oligoendopeptidase F
NECEvent2014_5_7_scaffold_109_9
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9361..10668
DNA (1308bp) protein (436aa)
folC; folylpolyglutamate synthase FolC (EC:6.3.2.17)
Folylpolyglutamate synthase FolC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MT71_CLOSA rbh
Protein FolC {ECO:0000313|EMBL:EKY24632.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
NECEvent2014_5_7_scaffold_109_10
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10672..12579
DNA (1908bp) protein (636aa)
HIRAN domain-containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M7Q7_9CLOT
HIRAN domain-containing protein {ECO:0000313|EMBL:EHJ00208.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
NECEvent2014_5_7_scaffold_109_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12631..12879)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HDR2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97588.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_5_7_scaffold_109_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13034..13915
DNA (882bp) protein (294aa)
Putative=40-residue YVTN family beta-propeller repeat protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ES21_9CLOT rbh
Lactonase, 7-bladed beta-propeller family protein {ECO:0000313|EMBL:AIY80357.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
hypothetical protein
NECEvent2014_5_7_scaffold_109_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13908..14441)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q9N2_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU71260.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_5_7_scaffold_109_14
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14524..15300
DNA (777bp) protein (259aa)
deacetylase, partial n=1 Tax=Clostridium saccharoperbutylacetonicum RepID=UPI000376C9C7 rbh
putative xylanase/chitin deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:AGX43728.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum D
NECEvent2014_5_7_scaffold_109_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15357..16064
DNA (708bp) protein (236aa)
Single-stranded DNA binding protein n=3 Tax=Clostridium butyricum RepID=C4IJ12_CLOBU rbh
Single-stranded DNA binding protein {ECO:0000313|EMBL:CDH91404.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (
single-strand binding family protein
NECEvent2014_5_7_scaffold_109_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16185..16895)
DNA (711bp) protein (237aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC:2.3.1.89)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00023633}; EC=2.3.1.89 {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase DapH n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVQ8_CLOSA rbh
NECEvent2014_5_7_scaffold_109_17
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17012..17527
DNA (516bp) protein (172aa)
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Clostridium colicanis 209318 RepID=N9XQB4_9CLOT
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:ENZ01908.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
ATP:corrinoid adenosyltransferase
NECEvent2014_5_7_scaffold_109_18
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17639..17803)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y186_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ01602.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
NECEvent2014_5_7_scaffold_109_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17940..18695)
DNA (756bp) protein (252aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MW89_CLOSA rbh
dapB; 4-hydroxy-tetrahydrodipicolinate reductase DapB
NECEvent2014_5_7_scaffold_109_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18707..19585)
DNA (879bp) protein (293aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Clostridium botulinum E RepID=B2V5A8_CLOBA rbh
NECEvent2014_5_7_scaffold_109_21
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19602..20591)
DNA (990bp) protein (330aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Clostridium colicanis 209318 RepID=N9Y248_9CLOT rbh
NECEvent2014_5_7_scaffold_109_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20769..21020
DNA (252bp) protein (84aa)
Small, acid-soluble spore protein, alpha/beta family n=2 Tax=Clostridium perfringens RepID=Q0SRS7_CLOPS
small acid-soluble spore protein alpha/beta family protein
Small, acid-soluble spore protein, alpha/beta family {ECO:0000313|EMBL:ABG87200.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
NECEvent2014_5_7_scaffold_109_23
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21087..21836
DNA (750bp) protein (250aa)
putative methyltransferase (EC:2.1.1.-)
Putative methyltransferase {ECO:0000313|EMBL:AGX43718.1}; EC=2.1.1.- {ECO:0000313|EMBL:AGX43718.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
Putative methyltransferase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MT58_CLOSA rbh
NECEvent2014_5_7_scaffold_109_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21838..22725
DNA (888bp) protein (296aa)
33 kDa chaperonin n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5URL2_CLOBO rbh
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=536233 species="Bacteria; Firmicutes; Clostri
hslO; Hsp33-like chaperonin
NECEvent2014_5_7_scaffold_109_trna_1
unknown

Not on your lists

comp(22887..22958)
DNA (72bp)
transferRNA
NECEvent2014_5_7_scaffold_109_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23074..23691
DNA (618bp) protein (206aa)
HD superfamily hydrolase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V0Z4_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83965.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_5_7_scaffold_109_26
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23989..24690)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MJ78_9CLOT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF56378.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetoni
NECEvent2014_5_7_scaffold_109_27
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24833..25723
DNA (891bp) protein (297aa)
Putative sporulation protein YtxC n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EL66_9CLOT rbh
Putative sporulation protein YtxC {ECO:0000313|EMBL:CDG01957.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4
ytxC; putative sporulation protein YtxC
NECEvent2014_5_7_scaffold_109_28
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25813..26439
DNA (627bp) protein (209aa)
Translation initiation factor IF-3 n=1 Tax=Clostridium sp. DL-VIII RepID=G7M0Z2_9CLOT
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
infC; translation initiation factor IF-3
NECEvent2014_5_7_scaffold_109_29
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


26461..26658
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4C6_9CLOT
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
50S ribosomal protein L35
Displaying items 1-30 of 58 in total

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