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NECEvent2014_5_7_scaffold_124

Alias: 175_006_scaffold_124

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_7_scaffold_124_1
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54..548)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WJ45_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ03111.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
NUDIX family hydrolase
NECEvent2014_5_7_scaffold_124_2
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(602..1294)
DNA (693bp) protein (231aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Clostridium sp. CAG:221 RepID=R6FYU6_9CLOT rbh
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
sfsA; sugar fermentation stimulation protein A
NECEvent2014_5_7_scaffold_124_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1721..2044
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0NA92_9CLOT
transcriptional regulator PadR-like family protein
Transcriptional regulator PadR-like family protein {ECO:0000313|EMBL:AIY83709.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
NECEvent2014_5_7_scaffold_124_4
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2037..2723
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F6F3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG00608.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
NECEvent2014_5_7_scaffold_124_5
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2723..3655
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G0Q2_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:ETD69995.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-59
hypothetical protein
NECEvent2014_5_7_scaffold_124_6
unknown

Not on your lists

comp(3687..4106)
DNA (420bp) protein (140aa)

This feature has no annotations

NECEvent2014_5_7_scaffold_124_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4204..4887)
DNA (684bp) protein (228aa)
Probable N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZA9_CLOBA
N-acetylmuramoyl-L-alanine amidase family protein
N-acetylmuramoyl-L-alanine amidase family protein {ECO:0000313|EMBL:AIY84659.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
NECEvent2014_5_7_scaffold_124_8
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4930..5376)
DNA (447bp) protein (149aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
Methionine sulfoxide reductase B n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G0B3_CLOPA
methionine sulfoxide reductase B
NECEvent2014_5_7_scaffold_124_9
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

5466..6998
DNA (1533bp) protein (511aa)
apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=GWF2_Clostridiales_36_10_curated
apolipoprotein N-acyltransferase
NECEvent2014_5_7_scaffold_124_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7036..7941)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC68_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96649.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative ATPase, BadF/BadG/BcrA/BcrD type
NECEvent2014_5_7_scaffold_124_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7951..9042)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEP5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH96648.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_5_7_scaffold_124_12
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9030..10289)
DNA (1260bp) protein (420aa)
PTS system, lactose/cellobiose-specific IIC component n=2 Tax=Erysipelothrix rhusiopathiae RepID=F5WTW8_ERYRF
PTS system lactose/cellobiose-specific transporter subunit IIC
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=525280 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.;" source="Erysipelothrix
NECEvent2014_5_7_scaffold_124_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10290..11444)
DNA (1155bp) protein (385aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKW2_9CLOT rbh
anmK; anhydro-N-acetylmuramic acid kinase
NECEvent2014_5_7_scaffold_124_14
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11500..12399)
DNA (900bp) protein (300aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMA
murQ; N-acetylmuramic acid 6-phosphate etherase MurQ (EC:4.2.1.126)
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBK7_9FIRM rbh
NECEvent2014_5_7_scaffold_124_15
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12442..13476)
DNA (1035bp) protein (345aa)
membrane protein n=1 Tax=Erysipelothrix tonsillarum RepID=UPI000374BBB7 rbh
outer surface protein
Uncharacterized protein {ECO:0000313|EMBL:BAK31905.1}; TaxID=650150 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.;" source="Erysipelothrix r
NECEvent2014_5_7_scaffold_124_16
Lactobacillus shenzhenensis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13489..14775)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Lactobacillus shenzhenensis LY-73 RepID=U4TZI5_9LACO rbh
PTS system lactose/cellobiose-specific transporter subunit IIC
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1231336 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus shenzhenensis LY
NECEvent2014_5_7_scaffold_124_17
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists

comp(14945..15997)
DNA (1053bp) protein (351aa)
Beta-lactamase family protein n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XEE5_9FIRM rbh
Beta-lactamase family protein {ECO:0000313|EMBL:CDD21983.1}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
beta-lactamase family protein
NECEvent2014_5_7_scaffold_124_18
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16121..16339
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Erysipelothrix tonsillarum RepID=UPI00037BF49D
Uncharacterized protein {ECO:0000313|EMBL:EFY09593.1}; TaxID=525280 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.;" source="Erysipelothrix r
hypothetical protein
NECEvent2014_5_7_scaffold_124_19
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16415..17251)
DNA (837bp) protein (279aa)
Putative Transcriptional regulator, RpiR family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EWZ4_9CLOT
Putative Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CDG00751.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
RpiR family phosphosugar-binding transcriptional regulator
NECEvent2014_5_7_scaffold_124_20
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17322..18497)
DNA (1176bp) protein (392aa)
Sodium/proton antiporter, CPA1 family (TC 2.A.36) n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QPG8_ACEAZ rbh
sodium/proton antiporter
Sodium/proton antiporter, CPA1 family (TC 2.A.36) {ECO:0000313|EMBL:ADL12409.1}; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium.;" source="A
NECEvent2014_5_7_scaffold_124_21
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18655..19557)
DNA (903bp) protein (301aa)
Cation efflux family protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G629_9CLOT
Cation efflux family protein {ECO:0000313|EMBL:CDB16964.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostr
cation efflux family protein
NECEvent2014_5_7_scaffold_124_22
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19742..20476)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ96625.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlett
hypothetical protein
NECEvent2014_5_7_scaffold_124_23
unknown

Not on your lists

20596..20895
DNA (300bp) protein (100aa)

This feature has no annotations

NECEvent2014_5_7_scaffold_124_24
unknown

Not on your lists

21040..21366
DNA (327bp) protein (109aa)

This feature has no annotations

NECEvent2014_5_7_scaffold_124_25
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21465..21854)
DNA (390bp) protein (130aa)
Putative chlorophyll synthesis pathway protein BchC n=1 Tax=Desulfitobacterium hafniense DP7 RepID=G9XUS0_DESHA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE84833.1}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium
NECEvent2014_5_7_scaffold_124_26
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22011..22595)
DNA (585bp) protein (195aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SUJ7_CLOC7
Alcohol dehydrogenase GroES domain-containing protein
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ADL52952.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cell
NECEvent2014_5_7_scaffold_124_27
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22710..24080)
DNA (1371bp) protein (457aa)
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:ACD24021.1}; EC=2.1.1.- {ECO:0000313|EMBL:ACD24021.1};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac
RNA methyltransferase n=1 Tax=Clostridium botulinum RepID=UPI0002E83447 rbh
NECEvent2014_5_7_scaffold_124_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24147..24509)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZX6_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL08126.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_5_7_scaffold_124_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25527..26945)
DNA (1419bp) protein (473aa)
pyk; pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
Pyruvate kinase n=1 Tax=Clostridium intestinale URNW RepID=U2PZD1_9CLOT rbh
NECEvent2014_5_7_scaffold_124_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27010..27969)
DNA (960bp) protein (320aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:
pfkA; 6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Clostridium colicanis 209318 RepID=N9WKN8_9CLOT rbh
Displaying items 1-30 of 49 in total

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