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NECEvent2014_5_7_scaffold_109_30

Organism: NECEvent2014_5_7_Clostridium_paraputrificum_30_38

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 16 / 38 MC: 2
Location: 26683..27042

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=10 Tax=Clostridium perfringens RepID=RL20_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 119.0
  • Bit_score: 226
  • Evalue 1.30e-56
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 95.8
  • Coverage: 119.0
  • Bit_score: 226
  • Evalue 3.70e-57
50S ribosomal protein L20 {ECO:0000255|HAMAP-Rule:MF_00382}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 119.0
  • Bit_score: 226
  • Evalue 1.80e-56

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 360
ATGGCAAGAGTAAAAAGAGCGGTTAATTCTCGTAAGAATCATAAAAAAGTTTTAAAGCTTGCAAAAGGATACTACGGTGGAAAGAGCAAGTTATTTAAGACTGCTAACGAATCAGTTATTAGAGCATTAAGAAATGCTTATGTTGGAAGAAGATTAAAGAAGAGAGATTTCAGAAGATTATGGATAGCTAGAATAAATGCTGCTACAAGAATGAATGGTCTTTCTTATTCAAAGTTCATGAATGGAATCAAGTTAGCTGGAGTTGACATAAACAGAAAGATGTTATCTGAAATAGCTATCAACGATCCAAAAGCATTTGCAGATTTAGTTGAATTAGCTAAGAAGCAATTAAACGCTTAA
PROTEIN sequence
Length: 120
MARVKRAVNSRKNHKKVLKLAKGYYGGKSKLFKTANESVIRALRNAYVGRRLKKRDFRRLWIARINAATRMNGLSYSKFMNGIKLAGVDINRKMLSEIAINDPKAFADLVELAKKQLNA*