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NECEvent2014_5_7_scaffold_171

Alias: 175_006_scaffold_171

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_7_scaffold_171_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..156)
DNA (156bp) protein (52aa)
Murein-lipoprotein (Fragment) n=1 Tax=Escherichia coli MS 198-1 RepID=D7XFN1_ECOLX
lpp; murein lipoprotein
Major outer membrane lipoprotein Lpp {ECO:0000313|EMBL:EMV60759.1}; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_5_7_scaffold_171_2
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(467..1879)
DNA (1413bp) protein (471aa)
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1401327 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriace
Pyruvate kinase n=1 Tax=Escherichia coli ATCC BAA-2193 RepID=V4V0E6_ECOLX rbh
NECEvent2014_5_7_scaffold_171_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2436..2645
DNA (210bp) protein (70aa)
Uncharacterized protein YdhZ n=1351 Tax=Enterobacteriaceae RepID=YDHZ_ECO57
ydhZ; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF56526.1}; TaxID=745156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_7_scaffold_171_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3101..3727
DNA (627bp) protein (209aa)
4Fe-4S binding domain protein n=77 Tax=Escherichia coli RepID=D7XFN5_ECOLX rbh
ydhY; hypothetical protein rbh
4Fe-4S binding domain protein {ECO:0000313|EMBL:EFJ70917.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_5_7_scaffold_171_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3748..5850
DNA (2103bp) protein (701aa)
Aldehyde ferredoxin oxidoreductase, tungsten cofactor-binding domain protein n=74 Tax=Escherichia coli RepID=D7XFN6_ECOLX rbh
Putative ferredoxin:oxidoreductase subunit {ECO:0000313|EMBL:CAR13158.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
ydhV; putative oxidoreductase
NECEvent2014_5_7_scaffold_171_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5863..6501
DNA (639bp) protein (213aa)
Uncharacterized protein n=75 Tax=Escherichia coli RepID=B7NBC3_ECOLU rbh
ydhW; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESA79793.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_171_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6565..7233
DNA (669bp) protein (223aa)
4Fe-4S binding domain protein n=96 Tax=Escherichia coli RepID=D7XFK2_ECOLX rbh
ydhX; putative 4Fe-4S ferridoxin-type subunit of oxidoreductase rbh
Ferredoxin {ECO:0000313|EMBL:ETE23247.1}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.
NECEvent2014_5_7_scaffold_171_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7230..8015
DNA (786bp) protein (262aa)
PhsC protein n=72 Tax=Escherichia coli RepID=D6IQE8_ECOLX rbh
ydhU; putative cytochrome b subunit of a reductase
Nickel-dependent hydrogenase B-type cytochrome subunit {ECO:0000313|EMBL:ESA79795.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esche
NECEvent2014_5_7_scaffold_171_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8067..8831
DNA (765bp) protein (255aa)
Uncharacterized protein n=74 Tax=Escherichia coli RepID=B7NBC0_ECOLU rbh
ydhT; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESA79796.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_171_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8843..10447)
DNA (1605bp) protein (535aa)
Uncharacterized protein n=75 Tax=Escherichia coli RepID=B7NBB9_ECOLU rbh
Uncharacterized protein {ECO:0000313|EMBL:CAR13153.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
ydhS; hypothetical protein
NECEvent2014_5_7_scaffold_171_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10573..10878)
DNA (306bp) protein (102aa)
Uncharacterized protein n=85 Tax=Escherichia coli RepID=B7NBB8_ECOLU
ydhR; hypothetical protein
Putative mono-oxygenase ydhR {ECO:0000313|EMBL:ESA79798.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_5_7_scaffold_171_trna_2
unknown

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comp(10989..11062)
DNA (74bp)
transferRNA
NECEvent2014_5_7_scaffold_171_trna_1
unknown

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comp(11070..11143)
DNA (74bp)
transferRNA
NECEvent2014_5_7_scaffold_171_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11452..12708
DNA (1257bp) protein (419aa)
Uncharacterized protein n=70 Tax=Escherichia coli RepID=B7NBB7_ECOLU rbh
ydhQ; hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EFJ70925.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_7_scaffold_171_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12749..14122)
DNA (1374bp) protein (458aa)
Multidrug resistance protein MdtK n=166 Tax=Escherichia coli RepID=MDTK_ECOLU rbh
multidrug efflux protein
Multidrug resistance protein MdtK {ECO:0000256|HAMAP-Rule:MF_00400, ECO:0000256|SAAS:SAAS00182200}; Multidrug-efflux transporter {ECO:0000256|HAMAP-Rule:MF_00400}; TaxID=1417796 species="Bacteria; Pro
NECEvent2014_5_7_scaffold_171_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14337..14978
DNA (642bp) protein (214aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EZK23032.1}; EC=2.5.1.9 {ECO:0000313|EMBL:EZK23032.1};; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; En
Riboflavin synthase n=999 Tax=Enterobacteriaceae RepID=RISA_ECOLI rbh
NECEvent2014_5_7_scaffold_171_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15018..16166)
DNA (1149bp) protein (383aa)
cfa; cyclopropane fatty acyl phospholipid synthase (EC:2.1.1.79) rbh
Cyclopropane fatty acyl phospholipid synthase (Unsaturated-phospholipid methyltransferase) n=87 Tax=Escherichia coli RepID=B7NBB4_ECOLU rbh
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:EQN27732.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_5_7_scaffold_171_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16457..17668)
DNA (1212bp) protein (404aa)
Major facilitator superfamily protein n=175 Tax=Escherichia coli RepID=D3GUF4_ECO44 rbh
ydhC; inner membrane transport protein YdhC rbh
Inner membrane transporter ydhC {ECO:0000313|EMBL:EQX87721.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_5_7_scaffold_171_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17781..18713
DNA (933bp) protein (311aa)
Transcriptional regulator, LysR family n=361 Tax=Enterobacteriaceae RepID=A8A0K6_ECOHS rbh
putative DNA-binding transcriptional regulator
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:END53335.1}; TaxID=1125638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_5_7_scaffold_171_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18710..19735)
DNA (1026bp) protein (342aa)
HTH-type transcriptional repressor PurR n=878 Tax=Enterobacteriaceae RepID=PURR_ECO55 rbh
purR; DNA-binding transcriptional repressor PurR
HTH-type transcriptional repressor PurR {ECO:0000256|HAMAP-Rule:MF_01277, ECO:0000256|SAAS:SAAS00011512}; Pur regulon repressor {ECO:0000256|HAMAP-Rule:MF_01277}; Purine nucleotide synthesis repressor
NECEvent2014_5_7_scaffold_171_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20034..20123
DNA (90bp) protein (30aa)
Uncharacterized protein ynhF n=1 Tax=Shigella dysenteriae 1617 RepID=E2XG18_SHIDY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZJ41361.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_171_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20289..21458
DNA (1170bp) protein (390aa)
Inner membrane transport protein YdhP n=586 Tax=Enterobacteriaceae RepID=YDHP_ECOLI rbh
major facilitator superfamily MFS_1
Inner membrane transporter ydhP {ECO:0000313|EMBL:EOU90893.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_5_7_scaffold_171_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21604..22185)
DNA (582bp) protein (194aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
Superoxide dismutase [Fe] n=1325 Tax=Bacteria RepID=SODF_ECO57 rbh
superoxide dismutase
NECEvent2014_5_7_scaffold_171_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22313..23140)
DNA (828bp) protein (276aa)
Lipoprotein n=96 Tax=Escherichia coli RepID=D6IQD5_ECOLX rbh
ydhO; putative exported hydrolase
Putative uncharacterized protein {ECO:0000313|EMBL:EFF12920.2}; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_5_7_scaffold_171_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23475..23822
DNA (348bp) protein (116aa)
Glutaredoxin-4 n=1432 Tax=Enterobacteriaceae RepID=GLRX4_ECO57
monothiol glutaredoxin protein
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli EC186
NECEvent2014_5_7_scaffold_171_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23873..28489)
DNA (4617bp) protein (1539aa)
ATP-dependent helicase Lhr n=72 Tax=Escherichia coli RepID=D6IQD3_ECOLX rbh
DEAD/DEAH box helicase {ECO:0000313|EMBL:EFJ70937.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
lhr; putative ATP-dependent helicase Lhr
NECEvent2014_5_7_scaffold_171_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28582..29229)
DNA (648bp) protein (216aa)
rnt; ribonuclease T (EC:3.1.13.-)
Ribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157, ECO:0000256|SAAS:SAAS00051933}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00157};; Exoribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157}; TaxID=1001989 spec
Ribonuclease T n=1091 Tax=Enterobacteriaceae RepID=RNT_ECO24 rbh
NECEvent2014_5_7_scaffold_171_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29332..29739)
DNA (408bp) protein (136aa)
Lactoylglutathione lyase {ECO:0000256|RuleBase:RU361179}; EC=4.4.1.5 {ECO:0000256|RuleBase:RU361179};; Glyoxalase I {ECO:0000256|RuleBase:RU361179}; TaxID=1116066 species="Bacteria; Proteobacteria; Ga
Lactoylglutathione lyase (Fragment) n=2 Tax=Escherichia coli RepID=E9TLV7_ECOLX
gloA; lactoylglutathione lyase
NECEvent2014_5_7_scaffold_171_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29820..30917)
DNA (1098bp) protein (366aa)
N-ethylmaleimide reductase n=334 Tax=Escherichia RepID=NEMA_ECOLI rbh
nemA; N-ethylmaleimide reductase
Oxidoreductase, FAD/FMN dependent {ECO:0000313|EMBL:EII22940.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_5_7_scaffold_171_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30954..31553)
DNA (600bp) protein (200aa)
TetR-family transcriptional regulator n=111 Tax=Escherichia coli RepID=D3GUE3_ECO44 rbh
TetR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ETE23226.1}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
Displaying items 1-30 of 42 in total

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