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NECEvent2014_5_7_scaffold_193

Alias: 175_006_scaffold_193

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_7_scaffold_193_1
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..157
DNA (156bp) protein (52aa)
Major outer membrane lipoprotein n=1433 Tax=Enterobacteriaceae RepID=LPP_ECO57
lpp; murein lipoprotein
Major outer membrane lipoprotein {ECO:0000313|EMBL:CCK02328.1}; TaxID=1208663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cron
NECEvent2014_5_7_scaffold_193_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(221..1225)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=82 Tax=Escherichia coli RepID=B7N514_ECOLU rbh
ynhG; hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ESA79787.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_193_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1374..1790)
DNA (417bp) protein (139aa)
Cysteine desulfuration protein SufE n=81 Tax=Escherichia coli RepID=SUFE_ECOLU
sufE; cysteine desufuration protein SufE
Cysteine desulfuration protein SufE {ECO:0000255|HAMAP-Rule:MF_01832}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source
NECEvent2014_5_7_scaffold_193_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1803..3023)
DNA (1221bp) protein (407aa)
sufS; bifunctional cysteine desulfurase/selenocysteine lyase (EC:4.4.1.16) rbh
Cysteine desulfurase {ECO:0000256|HAMAP-Rule:MF_01831, ECO:0000256|RuleBase:RU004506}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_01831, ECO:0000256|RuleBase:RU004506};; Selenocysteine beta-lyase {ECO:0000
Cysteine desulfurase n=95 Tax=Escherichia coli RepID=SUFS_ECOLU rbh
NECEvent2014_5_7_scaffold_193_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3020..4291)
DNA (1272bp) protein (424aa)
Component of SufBCD complex n=79 Tax=Escherichia coli RepID=B7N517_ECOLU rbh
sufD; cysteine desulfurase activator complex subunit SufD rbh
FeS assembly protein SufD {ECO:0000313|EMBL:EFJ73672.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_5_7_scaffold_193_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4266..5012)
DNA (747bp) protein (249aa)
Component of SufBCD complex, ATP-binding component of ABC superfamily n=125 Tax=Escherichia coli RepID=B7N518_ECOLU rbh
sufC; cysteine desulfurase rbh
Component of SufBCD complex, ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CAR13167.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacte
NECEvent2014_5_7_scaffold_193_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5022..6509)
DNA (1488bp) protein (496aa)
Component of SufBCD complex n=95 Tax=Escherichia coli RepID=B7N519_ECOLU rbh
sufB; component of SufB-SufC-SufD cysteine desulfurase activator complex
Component of SufB-SufC-SufD cysteine desulfurase activator complex {ECO:0000313|EMBL:CBG34676.1}; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteria
NECEvent2014_5_7_scaffold_193_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6518..6886)
DNA (369bp) protein (123aa)
FeS assembly scaffold SufA n=392 Tax=Escherichia coli RepID=B1LE52_ECOSM
sufA; FeS assembly scaffold SufA
FeS assembly scaffold SufA {ECO:0000313|EMBL:ACB18856.1}; TaxID=439855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_5_7_scaffold_193_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7435..7623)
DNA (189bp) protein (63aa)
Uncharacterized protein n=27 Tax=Escherichia coli RepID=D7XNJ2_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:END91983.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_193_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7723..8133)
DNA (411bp) protein (137aa)
1,4-dihydroxy-2-naphthoyl-CoA hydrolase {ECO:0000256|HAMAP-Rule:MF_01936}; Short=DHNA-CoA hydrolase {ECO:0000256|HAMAP-Rule:MF_01936};; EC=3.1.2.28 {ECO:0000256|HAMAP-Rule:MF_01936};; DHNA-CoA thioest
Esterase ydiI n=596 Tax=Enterobacteriaceae RepID=E2QMP7_ECOLX
hypothetical protein
NECEvent2014_5_7_scaffold_193_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8130..11186)
DNA (3057bp) protein (1019aa)
Oxidoreductase n=81 Tax=Escherichia coli RepID=D7JQT5_ECOLX rbh
FAD linked oxidase protein {ECO:0000313|EMBL:ESA79778.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
ydiJ; putative FAD-linked oxidoreductase rbh
NECEvent2014_5_7_scaffold_193_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11575..12687
DNA (1113bp) protein (371aa)
Uncharacterized protein n=93 Tax=Escherichia coli RepID=B7N524_ECOLU rbh
ydiK; putative inner membrane protein
Inner membrane protein {ECO:0000313|EMBL:ELG88796.1}; TaxID=1182725 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_7_scaffold_193_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13116..13472
DNA (357bp) protein (119aa)
Uncharacterized protein n=116 Tax=Escherichia coli RepID=D3GUI0_ECO44
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYZ92086.1}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_193_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13571..14785
DNA (1215bp) protein (405aa)
Inner membrane transporter ydiM n=73 Tax=Escherichia coli RepID=D6IQG7_ECOLX rbh
ydiM; putative MFS superfamily transporter rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFJ73663.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_5_7_scaffold_193_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15012..16277
DNA (1266bp) protein (422aa)
Transporter, major facilitator family protein n=85 Tax=Escherichia coli RepID=D7X7S8_ECOLX rbh
ydiN; putative transporter
Inner membrane transporter ydiN {ECO:0000313|EMBL:EHP65546.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_5_7_scaffold_193_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16289..17155
DNA (867bp) protein (289aa)
ydiB; quinate/shikimate dehydrogenase (EC:1.1.1.25)
Quinate/shikimate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01578}; EC=1.1.1.282 {ECO:0000255|HAMAP-Rule:MF_01578};; NAD-dependent shikimate 5-dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01578}; TaxID=585
Quinate/shikimate dehydrogenase n=87 Tax=Escherichia coli RepID=YDIB_ECOLU rbh
NECEvent2014_5_7_scaffold_193_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17186..17944
DNA (759bp) protein (253aa)
aroD; 3-dehydroquinate dehydratase (EC:4.2.1.10) rbh
3-dehydroquinate dehydratase {ECO:0000255|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000255|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000255|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000255|HA
3-dehydroquinate dehydratase n=86 Tax=Escherichia coli RepID=AROD_ECOLU rbh
NECEvent2014_5_7_scaffold_193_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18089..19684
DNA (1596bp) protein (532aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ente
Acetate CoA-transferase YdiF n=83 Tax=Escherichia coli RepID=B7N530_ECOLU rbh
ydiF; short chain acyl-CoA transferase subunit alpha/beta
NECEvent2014_5_7_scaffold_193_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19698..20849
DNA (1152bp) protein (384aa)
Probable acyl-CoA dehydrogenase YdiO n=1151 Tax=Enterobacteriaceae RepID=YDIO_ECO57 rbh
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase, N-terminal domain protein {ECO:0000313|EMBL:EHU40553.1}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
NECEvent2014_5_7_scaffold_193_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20892..21803)
DNA (912bp) protein (304aa)
Uncharacterized HTH-type transcriptional regulator YdiP n=342 Tax=Enterobacteriaceae RepID=YDIP_ECOLI rbh
AraC family transcriptional regulator rbh
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:KDY54589.1}; TaxID=1444126 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_5_7_scaffold_193_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21906..22082)
DNA (177bp) protein (59aa)
Uncharacterized protein n=966 Tax=Enterobacteriaceae RepID=A7ZMG2_ECO24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZK23065.1}; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_193_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22119..22883
DNA (765bp) protein (255aa)
Electron transfer flavoprotein FixA n=89 Tax=Escherichia coli RepID=D6JB33_ECOLX rbh
putative electron transfer flavoprotein beta subunit rbh
Electron transfer flavoprotein FixA {ECO:0000313|EMBL:EFF12964.2}; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_5_7_scaffold_193_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22903..23841
DNA (939bp) protein (313aa)
Electron transfer flavoprotein subunit YdiR n=97 Tax=Escherichia coli RepID=D6IQH6_ECOLX rbh
putative electron transfer flavoprotein subunit alpha
Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:EFJ78786.1}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esc
NECEvent2014_5_7_scaffold_193_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23897..25186
DNA (1290bp) protein (430aa)
Oxidoreductase FixC n=81 Tax=Escherichia coli RepID=D6IQH7_ECOLX rbh
ydiS; hypothetical protein rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:ESA79765.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_5_7_scaffold_193_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25183..25476
DNA (294bp) protein (98aa)
Uncharacterized protein n=792 Tax=Enterobacteriaceae RepID=C3T7Y2_ECOLX
ydiT; 4Fe-4S ferredoxin
Uncharacterized protein {ECO:0000313|EMBL:EFK02397.1}; TaxID=749545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_7_scaffold_193_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25533..27179
DNA (1647bp) protein (549aa)
Short chain acyl-CoA synthetase, anaerobic n=91 Tax=Escherichia coli RepID=B7N538_ECOLU rbh
Short-chain-fatty-acid-CoA ligase {ECO:0000313|EMBL:KDG95948.1}; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esc
ydiD; short chain acyl-CoA synthetase
NECEvent2014_5_7_scaffold_193_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27236..29614)
DNA (2379bp) protein (793aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PI
pps; phosphoenolpyruvate synthase (EC:2.7.9.2) rbh
Phosphoenolpyruvate synthase n=71 Tax=Escherichia coli RepID=B7N539_ECOLU rbh
NECEvent2014_5_7_scaffold_193_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29947..30780
DNA (834bp) protein (278aa)
Phosphoenolpyruvate synthase regulatory protein n=69 Tax=Escherichia coli RepID=PSRP_ECOLU rbh
ydiA; hypothetical protein
Phosphoenolpyruvate synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062}; Short=PEP synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062};; Short=PSRP {ECO:0000256|HAMAP-Rule:MF_01062
NECEvent2014_5_7_scaffold_193_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30937..31983
DNA (1047bp) protein (349aa)
aroH; phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR
Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp-sensitive n=625 Tax=Enterobacteriaceae RepID=AROH_ECOL6 rbh
NECEvent2014_5_7_scaffold_193_30
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32115..32306
DNA (192bp) protein (64aa)
Conserved protein, hemin uptake protein HemP-like protein n=31 Tax=Enterobacteriaceae RepID=G4Q0Q4_ECOLX
ydiE; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIQ30181.1}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 9
Displaying items 1-30 of 37 in total

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