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NECEvent2014_5_7_scaffold_211

Alias: 175_006_scaffold_211

Search features with annotation key words

Displaying items 31-56 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_7_scaffold_211_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29584..30624
DNA (1041bp) protein (347aa)
Permease n=75 Tax=Escherichia coli RepID=D6ITI5_ECOLX rbh
yraQ; putative permease rbh
Putative permease {ECO:0000313|EMBL:EFJ74212.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS
NECEvent2014_5_7_scaffold_211_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30746..31321)
DNA (576bp) protein (192aa)
Phospholipid-binding domain protein n=114 Tax=Escherichia coli RepID=B1LFQ1_ECOSM rbh
putative phospholipid-binding protein rbh
Membrane protein {ECO:0000313|EMBL:KJH07628.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
NECEvent2014_5_7_scaffold_211_31
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31331..31921)
DNA (591bp) protein (197aa)
DnaA initiator-associating protein DiaA n=768 Tax=Enterobacteriaceae RepID=DIAA_ECO24 rbh
DnaA initiator-associating protein DiaA
DnaA initiator-associating protein DiaA {ECO:0000256|HAMAP-Rule:MF_01157, ECO:0000256|SAAS:SAAS00014432}; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enter
NECEvent2014_5_7_scaffold_211_32
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31941..32336)
DNA (396bp) protein (132aa)
UPF0102 protein YraN n=73 Tax=Escherichia coli RepID=YRAN_ECOLU
yraN; hypothetical protein
UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_211_33
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32294..34330)
DNA (2037bp) protein (679aa)
Penicillin-binding protein activator LpoA n=66 Tax=Escherichia coli RepID=B7NDD1_ECOLU rbh
Penicillin-binding protein activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890}; Short=PBP activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890};; Flags: Precursor;; TaxID=585056 species="Bacteria; Proteobacte
yraM; hypothetical protein rbh
NECEvent2014_5_7_scaffold_211_34
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34395..35258
DNA (864bp) protein (288aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Ribosomal RNA small subunit methyltransferase I n=123 Tax=Escherichia coli RepID=E2QEI2_ECOLX rbh
16S rRNA methyltransferase
NECEvent2014_5_7_scaffold_211_35
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35308..36021)
DNA (714bp) protein (238aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Glucosamine-6-phosphate deaminase n=1 Tax=Escherichia coli KOEGE 68 (182a) RepID=T8I941_ECOLX rbh
agaI; galactosamine-6-phosphate isomerase
NECEvent2014_5_7_scaffold_211_36
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36076..36867)
DNA (792bp) protein (264aa)
Galactosamine-specific PTS system enzyme IID component n=1112 Tax=Enterobacteriaceae RepID=C3ST22_ECOLX rbh
agaD2; PTS system N-acetylgalactosamine-specific transporter subunit IID
N-acetylgalactosamine-specific PTS system transporter subunit IID {ECO:0000313|EMBL:AFJ30816.1}; TaxID=741093 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
NECEvent2014_5_7_scaffold_211_37
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36857..37660)
DNA (804bp) protein (268aa)
agaC; PTS system N-acetylgalactosamine-specific transporter subunit IIC (EC:2.7.1.69)
N-acetylgalactosamine permease IIC component 1 n=257 Tax=Escherichia coli RepID=E2QEH9_ECOLX rbh
N-acetylgalactosamine permease IIC component 1 {ECO:0000313|EMBL:EQX85457.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
NECEvent2014_5_7_scaffold_211_38
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37699..38175)
DNA (477bp) protein (159aa)
agaB; PTS system N-acetylgalactosamine-specific transporter subunit IIB (EC:2.7.1.69)
Galactosamine-specific PTS system enzyme IIB component n=699 Tax=Escherichia RepID=C3ST27_ECOLX rbh
PTS system, mannose/fructose/sorbose family, IIB component {ECO:0000313|EMBL:ELC14457.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; E
NECEvent2014_5_7_scaffold_211_39
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38342..39202)
DNA (861bp) protein (287aa)
kbaY; tagatose-bisphosphate aldolase (EC:4.1.2.40)
D-tagatose-1,6-bisphosphate aldolase subunit KbaY {ECO:0000256|HAMAP-Rule:MF_01293}; Short=TBPA {ECO:0000256|HAMAP-Rule:MF_01293};; Short=TagBP aldolase {ECO:0000256|HAMAP-Rule:MF_01293};; EC=4.1.2.40
D-tagatose-1,6-bisphosphate aldolase subunit KbaY n=84 Tax=Escherichia coli RepID=KBAY_ECOLU rbh
NECEvent2014_5_7_scaffold_211_40
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39215..40369)
DNA (1155bp) protein (385aa)
Tagatose-6-phosphate ketose/aldose isomerase n=65 Tax=Escherichia coli RepID=B7NDC4_ECOLU rbh
agaS; tagatose-6-phosphate ketose/aldose isomerase rbh
Sugar isomerase, AgaS family {ECO:0000313|EMBL:EFJ74279.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_5_7_scaffold_211_41
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40719..41852)
DNA (1134bp) protein (378aa)
agaA; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=749549 species=
N-acetylglucosamine-6-phosphate deacetylase n=72 Tax=Escherichia coli RepID=B7NDC3_ECOLU rbh
NECEvent2014_5_7_scaffold_211_42
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41849..42283)
DNA (435bp) protein (145aa)
putative phosphotransferase system enzyme subunit (N-acetyl-galactosamine / galactosamine PTS system enzyme IIA component) (EC:2.7.1.69)
Putative phosphotransferase system enzyme subunit (N-acetyl-galactosamine / galactosamine PTS system enzyme IIA component) {ECO:0000313|EMBL:CAR14772.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CAR14772.1};; Ta
PTS system fructose IIA component n=65 Tax=Escherichia coli RepID=D7X642_ECOLX
NECEvent2014_5_7_scaffold_211_43
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42301..43179)
DNA (879bp) protein (293aa)
PTS system N-acetylgalactosamine-specific, IID component n=765 Tax=Enterobacteriaceae RepID=A8A4U9_ECOHS rbh
PTS system hexose/hexosamine family transporter permease IID
PTS system N-acetylgalactosamine-specific IID component {ECO:0000313|EMBL:BAI56511.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esche
NECEvent2014_5_7_scaffold_211_44
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43169..43948)
DNA (780bp) protein (260aa)
N-acetylgalactosamine permease IIC component 2 n=1162 Tax=Enterobacteriaceae RepID=C3ST47_ECOLX rbh
agaW; PTS system N-acetylgalactosamine-specific transporter subunit IIC
Uncharacterized protein {ECO:0000313|EMBL:EHP65746.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_211_45
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43959..44432)
DNA (474bp) protein (158aa)
PTS system, N-acetylgalactosamine-specific, IIB component n=754 Tax=Enterobacteriaceae RepID=A8A4U7_ECOHS rbh
agaV; acetylgalactosamine-specific PTS system enzyme IIB component
Galactosamine-specific PTS system enzyme IIB component {ECO:0000313|EMBL:EIQ26206.1}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigel
NECEvent2014_5_7_scaffold_211_46
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44455..45735)
DNA (1281bp) protein (427aa)
kbaZ; tagatose 6-phosphate aldolase 1, kbaZ subunit (EC:4.1.2.40)
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ n=59 Tax=Escherichia coli RepID=KBAZ_ECOLU rbh
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ {ECO:0000256|HAMAP-Rule:MF_01295}; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escher
NECEvent2014_5_7_scaffold_211_47
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45984..46793
DNA (810bp) protein (270aa)
Transcriptional regulator, DeoR family n=139 Tax=Enterobacteriaceae RepID=B1LFN4_ECOSM rbh
agaR; DNA-binding transcriptional regulator AgaR rbh
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ACB16072.1}; TaxID=439855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_5_7_scaffold_211_48
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46848..47312)
DNA (465bp) protein (155aa)
Uncharacterized protein n=62 Tax=Escherichia coli RepID=B7NDB6_ECOLU rbh
yhaV; hypothetical protein
Toxin-antitoxin system, toxin component, RelE family {ECO:0000313|EMBL:EFJ74269.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheric
NECEvent2014_5_7_scaffold_211_49
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47312..47647)
DNA (336bp) protein (112aa)
Regulator PrlF n=67 Tax=Escherichia coli RepID=D6ITG5_ECOLX
sohA; putative regulator PrlF
Toxin-antitoxin system, antitoxin component, AbrB family {ECO:0000313|EMBL:EFJ81311.1}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esch
NECEvent2014_5_7_scaffold_211_50
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47796..49367)
DNA (1572bp) protein (524aa)
garD; (D)-galactarate dehydrogenase (EC:4.2.1.42) rbh
(D)-galactarate dehydrogenase n=89 Tax=Escherichia coli RepID=B7NDB4_ECOLU rbh
Galactarate dehydratase {ECO:0000313|EMBL:ESD36925.1}; TaxID=1268989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_211_51
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49742..51076
DNA (1335bp) protein (445aa)
Galactarate permease GarP n=163 Tax=Escherichia RepID=B1LFM8_ECOSM rbh
garP; galactarate transporter
Galactonate transporter {ECO:0000313|EMBL:EYV13832.1}; TaxID=1446560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_211_52
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51092..51862
DNA (771bp) protein (257aa)
garL; alpha-dehydro-beta-deoxy-D-glucarate aldolase (EC:4.1.2.20)
5-keto-4-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; Short=KDGluc aldolase {ECO:0000256|HAMAP-Rule:MF_01291};; Short=KDGlucA {ECO:0000256|HAMAP-Rule:MF_01291};; EC=4.1.2.20 {ECO:0000
5-keto-4-deoxy-D-glucarate aldolase n=804 Tax=Enterobacteriaceae RepID=GARL_ECO24 rbh
NECEvent2014_5_7_scaffold_211_53
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51892..52782
DNA (891bp) protein (297aa)
garR; tartronate semialdehyde reductase (EC:1.1.1.60) rbh
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:EFJ74262.1}; EC=1.1.1.60 {ECO:0000313|EMBL:EFJ74262.1};; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; E
Tartronate semialdehyde reductase n=64 Tax=Escherichia coli RepID=B7NDB1_ECOLU rbh
NECEvent2014_5_7_scaffold_211_54
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52879..54024
DNA (1146bp) protein (382aa)
garK; glycerate kinase I (EC:2.7.1.31)
Glycerate kinase I n=73 Tax=Escherichia coli RepID=B7NDB0_ECOLU rbh
Glycerate kinase {ECO:0000313|EMBL:ETE26222.1}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU
Displaying items 31-56 of 56 in total

View Taxonomy