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NECEvent2014_5_7_scaffold_211

Alias: 175_006_scaffold_211

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Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_7_scaffold_211_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1390
DNA (1389bp) protein (463aa)
hflB; ATP-dependent metalloprotease (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterob
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Escherichia coli HVH 27 (4-7449267) RepID=T5UHR1_ECOLX
NECEvent2014_5_7_scaffold_211_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1384..1812
DNA (429bp) protein (143aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=670890 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enteroba
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Escherichia coli RepID=M9AGZ8_ECOLX
hflB; ATP-dependent metalloprotease
NECEvent2014_5_7_scaffold_211_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1902..2750
DNA (849bp) protein (283aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|Rule
7,8-dihydropteroate synthase n=6 Tax=Escherichia coli RepID=C3SSK7_ECOLX rbh
folP; 7,8-dihydropteroate synthase
NECEvent2014_5_7_scaffold_211_4
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2743..4080
DNA (1338bp) protein (446aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=932676 species="Bacteri
Phosphoglucosamine mutase n=513 Tax=Enterobacteriaceae RepID=GLMM_ECO27 rbh
glmM; phosphoglucosamine mutase
NECEvent2014_5_7_scaffold_211_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4308..4640
DNA (333bp) protein (111aa)
Protein-export membrane protein SecG n=989 Tax=Enterobacteriaceae RepID=SECG_ECO57
secG; preprotein translocase subunit SecG
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:END50565.1}; TaxID=1125638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_5_7_scaffold_211_trna_1
unknown

Not on your lists

4655..4738
DNA (84bp)
transferRNA
NECEvent2014_5_7_scaffold_211_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5308..6825
DNA (1518bp) protein (506aa)
Inner membrane protein yhbX n=95 Tax=Escherichia coli RepID=B1LFS4_ECOSM rbh
yhbX; inner membrane protein yhbX
Arylsulfatase {ECO:0000313|EMBL:ESA93258.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713
NECEvent2014_5_7_scaffold_211_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6833..8176)
DNA (1344bp) protein (448aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009500}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
Argininosuccinate synthase n=576 Tax=Escherichia RepID=ASSY_ECO7I rbh
argG; argininosuccinate synthetase
NECEvent2014_5_7_scaffold_211_trna_2
unknown

Not on your lists

8524..8597
DNA (74bp)
transferRNA
NECEvent2014_5_7_scaffold_211_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8620..9072
DNA (453bp) protein (151aa)
Ribosome maturation factor RimP n=796 Tax=Enterobacteriaceae RepID=RIMP_ECO24
yhbC; hypothetical protein
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteri
NECEvent2014_5_7_scaffold_211_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9100..10587
DNA (1488bp) protein (496aa)
Transcription termination/antitermination factor NusA n=273 Tax=Escherichia coli RepID=B1LFS1_ECOSM rbh
nusA; transcription termination/antitermination L factor NusA
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Es
NECEvent2014_5_7_scaffold_211_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10612..13284
DNA (2673bp) protein (891aa)
Translation initiation factor IF-2 n=2 Tax=Escherichia coli RepID=L3C391_ECOLX rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacte
infB; translation initiation factor IF-2 rbh
NECEvent2014_5_7_scaffold_211_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13443..13844
DNA (402bp) protein (134aa)
Ribosome-binding factor A n=4 Tax=Enterobacteriaceae RepID=C1HIH1_9ESCH
rbfA; ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_5_7_scaffold_211_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13844..14788
DNA (945bp) protein (315aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) s
tRNA pseudouridine synthase B n=1113 Tax=Enterobacteriaceae RepID=TRUB_ECO57 rbh
truB; tRNA pseudouridine synthase B
NECEvent2014_5_7_scaffold_211_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14937..15179
DNA (243bp) protein (81aa)
30S ribosomal protein S15 n=216 Tax=Escherichia coli RepID=RS15_ECO57
rpsO; 30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_5_7_scaffold_211_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15330..17465
DNA (2136bp) protein (712aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=126898
Polyribonucleotide nucleotidyltransferase n=390 Tax=Escherichia RepID=PNP_ECO45 rbh
pnp; polynucleotide phosphorylase/polyadenylase
NECEvent2014_5_7_scaffold_211_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17574..18458
DNA (885bp) protein (295aa)
Lipoprotein NlpI n=77 Tax=Escherichia coli RepID=NLPI_ECOLU rbh
nlpI; TPR repeat lipoprotein rbh
Lipoprotein NlpI {ECO:0000256|PIRNR:PIRNR004654}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli D
NECEvent2014_5_7_scaffold_211_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18756..20423
DNA (1668bp) protein (556aa)
deaD; ATP-dependent RNA helicase (DEAD-box protein) (EC:3.6.1.-)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=749549 species
ATP-dependent RNA helicase DeaD n=85 Tax=Enterobacteriaceae RepID=B7NDE8_ECOLU
NECEvent2014_5_7_scaffold_211_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20577..21821
DNA (1245bp) protein (415aa)
Tryptophan transporter of high affinity n=76 Tax=Escherichia coli RepID=B7NDE7_ECOLU rbh
mtr; tryptophan permease rbh
Tryptophan-specific transport protein {ECO:0000313|EMBL:CBG36279.1}; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_5_7_scaffold_211_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21882..22412)
DNA (531bp) protein (177aa)
Uncharacterized protein n=84 Tax=Escherichia coli RepID=D3GXQ1_ECO44 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQX85476.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_211_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22570..23289
DNA (720bp) protein (240aa)
Uncharacterized protein n=74 Tax=Escherichia coli RepID=B7NDE5_ECOLU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESA93273.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_211_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23267..24274)
DNA (1008bp) protein (336aa)
Luciferase family oxidoreductase, FMN-dependent, PP_0088 family {ECO:0000313|EMBL:EFJ97251.1}; EC=1.-.-.- {ECO:0000313|EMBL:EFJ97251.1};; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobac
Uncharacterized protein YhbW n=714 Tax=Enterobacteriaceae RepID=YHBW_ECOL6 rbh
hypothetical protein
NECEvent2014_5_7_scaffold_211_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24355..25233)
DNA (879bp) protein (293aa)
Protease n=74 Tax=Escherichia coli RepID=B7NDE3_ECOLU rbh
putative peptidase rbh
Putative peptidase {ECO:0000313|EMBL:CBG36275.1}; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O4
NECEvent2014_5_7_scaffold_211_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25242..26237)
DNA (996bp) protein (332aa)
Peptidase (Collagenase-like) n=105 Tax=Escherichia RepID=B7NDE2_ECOLU rbh
yhbU; peptidase (collagenase-like)
Peptidase, U32 family {ECO:0000313|EMBL:ESD38245.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
NECEvent2014_5_7_scaffold_211_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26446..26970
DNA (525bp) protein (175aa)
Uncharacterized protein YhbT n=1119 Tax=Enterobacteriaceae RepID=YHBT_ECO57 rbh
yhbT; hypothetical protein
Putative lipid carrier protein {ECO:0000313|EMBL:EGI20221.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_5_7_scaffold_211_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26964..27467
DNA (504bp) protein (168aa)
Uncharacterized N-acetyltransferase YhbS n=1340 Tax=Enterobacteriaceae RepID=YHBS_ECO57 rbh
yhbS; hypothetical protein
Acyltransferase {ECO:0000313|EMBL:EQZ98233.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA
NECEvent2014_5_7_scaffold_211_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27454..27756)
DNA (303bp) protein (101aa)
UPF0213 protein YhbQ n=71 Tax=Escherichia coli RepID=YHBQ_ECOLU
yhbQ; GIY-YIG nuclease superfamily protein
UPF0213 protein YhbQ {ECO:0000255|HAMAP-Rule:MF_01029}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_211_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27807..28250
DNA (444bp) protein (148aa)
UPF0306 protein YhbP n=85 Tax=Escherichia coli RepID=YHBP_ECOLU rbh
yhbP; hypothetical protein rbh
UPF0306 protein YhbP {ECO:0000256|HAMAP-Rule:MF_00764}; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_5_7_scaffold_211_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28230..28748)
DNA (519bp) protein (173aa)
Putative uncharacterized protein yhbO n=1 Tax=Escherichia fergusonii ECD227 RepID=F0JS53_ESCFE rbh
hypothetical protein
Intracellular protease, PfpI family {ECO:0000313|EMBL:EFK70532.1}; TaxID=679205 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_5_7_scaffold_211_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28876..29511
DNA (636bp) protein (212aa)
Uncharacterized protein n=85 Tax=Escherichia coli RepID=D3GXP1_ECO44 rbh
hypothetical protein
Putative nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:CAR14786.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
Displaying items 1-30 of 56 in total

View Taxonomy