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NECEvent2014_5_7_scaffold_211_12

Organism: NECEvent2014_5_7_Escherichia_coli_50_56_partial

partial RP 29 / 55 MC: 4 BSCG 28 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 13844..14788

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) s similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 314.0
  • Bit_score: 624
  • Evalue 7.90e-176
tRNA pseudouridine synthase B n=1113 Tax=Enterobacteriaceae RepID=TRUB_ECO57 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 314.0
  • Bit_score: 624
  • Evalue 5.60e-176
  • rbh
truB; tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 314.0
  • Bit_score: 624
  • Evalue 1.60e-176

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGAGTCGTCCTCGTCGTCGCGGTCGCGACATTAACGGCGTGTTGTTGCTGGATAAACCGCAGGGTATGTCCAGCAACGATGCGCTGCAAAAAGTGAAACGGATTTATAACGCCAACCGTGCTGGGCATACCGGTGCGCTGGACCCGCTGGCAACTGGCATGTTGCCAATTTGCCTCGGGGAAGCGACGAAGTTTTCCCAGTATCTGCTGGACTCCGACAAACGCTATAGGGTGATTGCGCGTCTTGGACAGCGTACCGATACGTCTGACGCCGACGGACAAATCGTTGAAGAACGTCCGGTAACCTTTAGTGCAGAGCAACTGGCGGCGGCGCTGGATACTTTCCGTGGCGATATCGAACAGATCCCTTCGATGTATTCAGCACTGAAATACCAGGGCAAAAAACTGTACGAATATGCGCGTCAGGGCATTGAAGTACCGCGTGAAGCGCGCCCGATTACCGTTTATGAATTGCTGTTTATTCGCCACGAAGGCAATGAGCTGGAGCTGGAAATTCACTGCTCAAAAGGCACTTATATCCGCACCATCATTGATGACCTGGGTGAAAAACTCGGTTGTGGCGCGCATGTTATTTACCTGCGTCGTCTGGCGGTAAGTAAATATCCGGTTGAACGGATGGTGACCCTGGAACATCTGCGTGAACTGGTTGAACAAGCCGAACAGCAGGATATTCCAGCCGCGGAGTTACTTGATCCATTACTGATGCCAATGGACAGTCCAGCTTCGGACTACCCGGTGGTGAATCTTCCGTTAACGTCTTCTGTTTACTTCAAAAATGGTAACCCGGTTCGTACATCCGGTGCGCCGCTGGAAGGACTGGTTCGCGTTACAGAAGGTGAGAACGGCAAGTTTATCGGTATGGGCGAAATTGACGATGAAGGCCGCGTCGCGCCTCGTCGCCTGGTGGTTGAATACCCGGCGTAA
PROTEIN sequence
Length: 315
MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVTFSAEQLAAALDTFRGDIEQIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEIHCSKGTYIRTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEHLRELVEQAEQQDIPAAELLDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGENGKFIGMGEIDDEGRVAPRRLVVEYPA*