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NECEvent2014_5_7_scaffold_402

Alias: 175_006_scaffold_402

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_7_scaffold_402_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..3315)
DNA (3315bp) protein (1105aa)
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170, ECO:0000313|EMBL:CBG33014.1};; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacter
DNA polymerase III alpha subunit n=83 Tax=Escherichia coli RepID=B7N851_ECOLU rbh
NECEvent2014_5_7_scaffold_402_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3352..3948)
DNA (597bp) protein (199aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
Ribonuclease HII n=346 Tax=Escherichia RepID=RNH2_ECO27 rbh
ribonuclease HII rbh
NECEvent2014_5_7_scaffold_402_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3945..5093)
DNA (1149bp) protein (383aa)
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182) rbh
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=1268986 species="B
Lipid-A-disaccharide synthase n=83 Tax=Escherichia coli RepID=LPXB_ECOLU rbh
NECEvent2014_5_7_scaffold_402_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5093..5881)
DNA (789bp) protein (263aa)
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1168 Tax=cellular organisms RepID=LPXA_ECO24 rbh
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMA
NECEvent2014_5_7_scaffold_402_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5885..6340)
DNA (456bp) protein (152aa)
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1398 Tax=Enterobacteriaceae RepID=FABZ_ECO24 rbh
NECEvent2014_5_7_scaffold_402_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6445..7470)
DNA (1026bp) protein (342aa)
lpxD; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase (EC:2.3.1.-) rbh
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; Short=UDP-3-O-(3-OHC14)-GlcN N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523};; EC=2.3.1.191 {ECO:000025
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase n=733 Tax=Enterobacteriaceae RepID=LPXD_ECO57 rbh
NECEvent2014_5_7_scaffold_402_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7474..7959)
DNA (486bp) protein (162aa)
Chaperone protein Skp n=1412 Tax=Enterobacteriaceae RepID=SKP_ECO57 rbh
skp; periplasmic chaperone
Chaperone protein skp {ECO:0000256|PIRNR:PIRNR002094}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_7_scaffold_402_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8081..10513)
DNA (2433bp) protein (811aa)
Outer membrane protein assembly factor BamA n=1284 Tax=Enterobacteriaceae RepID=BAMA_ECO24 rbh
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; En
yaeT; outer membrane protein assembly factor YaeT
NECEvent2014_5_7_scaffold_402_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10543..11895)
DNA (1353bp) protein (451aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacte
Zinc metallopeptidase n=77 Tax=Escherichia coli RepID=B7N843_ECOLU rbh
yaeL; zinc metallopeptidase RseP rbh
NECEvent2014_5_7_scaffold_402_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11907..12656)
DNA (750bp) protein (250aa)
phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriale
Phosphatidate cytidylyltransferase n=1 Tax=Escherichia coli P0298942.4 RepID=N3LYQ5_ECOLX
NECEvent2014_5_7_scaffold_402_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12777..13535)
DNA (759bp) protein (253aa)
undecaprenyl pyrophosphate synthase (EC:2.5.1.31)
Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.31 {ECO:0000256|HAMAP-Rule:MF_01139};; Ditrans,polycis-undecapreny
Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) n=1179 Tax=Enterobacteriaceae RepID=A7ZHR4_ECO24 rbh
NECEvent2014_5_7_scaffold_402_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13724..14920)
DNA (1197bp) protein (399aa)
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=574 Tax=Enterobacteriaceae RepID=DXR_ECOLI rbh
NECEvent2014_5_7_scaffold_402_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15012..15569)
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=1434 Tax=Bacteria RepID=RRF_ECO24 rbh
frr; ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1268997 species="Bacteria;
NECEvent2014_5_7_scaffold_402_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15861..16586)
DNA (726bp) protein (242aa)
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
Uridylate kinase n=1427 Tax=Enterobacteriaceae RepID=PYRH_ECO24 rbh
NECEvent2014_5_7_scaffold_402_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16733..17584)
DNA (852bp) protein (284aa)
Elongation factor Ts n=1359 Tax=Enterobacteriaceae RepID=EFTS_ECO24 rbh
tsf; elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacte
NECEvent2014_5_7_scaffold_402_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17842..18240)
DNA (399bp) protein (133aa)
30S ribosomal protein S2 n=1 Tax=Escherichia coli P0305260.2 RepID=N3QJU0_ECOLX
rpsB; 30S ribosomal protein
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
Displaying 16 items

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