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NECEvent2014_5_7_scaffold_424

Alias: 175_006_scaffold_424

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_7_scaffold_424_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..2627
DNA (2625bp) protein (875aa)
Uncharacterized protein (Fragment) n=2 Tax=Escherichia coli RepID=T6ZQQ5_ECOLX rbh
Uncharacterized protein {ECO:0000313|EMBL:EOV01404.1}; TaxID=1169355 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
NECEvent2014_5_7_scaffold_424_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2679..4376)
DNA (1698bp) protein (566aa)
Transcriptional regulator n=74 Tax=Escherichia coli RepID=D3H2F7_ECO44 rbh
invasion protein regulator
Putative Transcriptional regulator {ECO:0000313|EMBL:CAR15325.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esc
NECEvent2014_5_7_scaffold_424_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4579..5928)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=70 Tax=Escherichia coli RepID=B7NEX1_ECOLU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAR15324.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_7_scaffold_424_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5972..7123)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=71 Tax=Escherichia coli RepID=B7NEX0_ECOLU rbh
putative type III effector protein
Uncharacterized protein {ECO:0000313|EMBL:EFJ76149.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_7_scaffold_424_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7136..8917)
DNA (1782bp) protein (594aa)
Uncharacterized protein n=71 Tax=Escherichia coli RepID=B7NEW9_ECOLU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESA78405.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_424_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9164..9661)
DNA (498bp) protein (166aa)
Uncharacterized protein n=77 Tax=Escherichia coli RepID=B7NEW8_ECOLU rbh
putative type III secretion chaperone rbh
Type III secretion low calcium response chaperone LcrH/SycD {ECO:0000313|EMBL:EFJ76147.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; E
NECEvent2014_5_7_scaffold_424_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9963..10325)
DNA (363bp) protein (121aa)
Uncharacterized protein n=76 Tax=Escherichia coli RepID=B7NEW7_ECOLU
yicS; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESA78407.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_424_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10466..11284
DNA (819bp) protein (273aa)
Lipoprotein n=66 Tax=Escherichia coli RepID=B7NEW6_ECOLU rbh
nlpA; cytoplasmic membrane lipoprotein-28 rbh
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52
NECEvent2014_5_7_scaffold_424_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11288..12211)
DNA (924bp) protein (308aa)
Uncharacterized protein n=79 Tax=Escherichia coli RepID=B7NEW5_ECOLU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:KDA55878.1}; TaxID=1444037 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_424_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12322..13506)
DNA (1185bp) protein (395aa)
Sugar efflux transporter C n=402 Tax=Enterobacteriaceae RepID=A7ZTL3_ECO24 rbh
sugar efflux transporter
Sugar efflux transporter C {ECO:0000313|EMBL:KEN44495.1}; TaxID=1444091 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_5_7_scaffold_424_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14126..14392
DNA (267bp) protein (89aa)
Uncharacterized protein n=7 Tax=Escherichia coli RepID=D7X0Q1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESA78414.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
putative transposase
NECEvent2014_5_7_scaffold_424_trna_1
unknown

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comp(14148..14238)
DNA (91bp)
transferRNA
NECEvent2014_5_7_scaffold_424_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14531..15913
DNA (1383bp) protein (461aa)
Sugar transporter, glycoside-pentoside-hexuronide (GPH):cation symporter family n=104 Tax=Escherichia RepID=B1LKA1_ECOSM rbh
yicJ; transporter rbh
Glycoside/pentoside/hexuronide transporter {ECO:0000313|EMBL:EFK19305.1}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
NECEvent2014_5_7_scaffold_424_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15923..17077
DNA (1155bp) protein (385aa)
Glycosyl hydrolases family 31 family protein n=75 Tax=Escherichia coli RepID=G1YWP4_ECOLX
putative glycosyl hydrolase
Glycosyl hydrolase, family 31 {ECO:0000313|EMBL:ESD41879.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
Displaying 14 items

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