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NECEvent2014_5_7_scaffold_528

Alias: 175_006_scaffold_528

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_7_scaffold_528_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..554)
DNA (552bp) protein (184aa)
Uncharacterized protein yjaG n=471 Tax=Escherichia RepID=E2QJ25_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETE20033.1}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_528_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(597..1268)
DNA (672bp) protein (224aa)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-
Endonuclease V n=1 Tax=Escherichia coli IS5 RepID=V6EQL2_ECOLX rbh
nfi; endonuclease V
NECEvent2014_5_7_scaffold_528_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1278..2342)
DNA (1065bp) protein (355aa)
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
Uroporphyrinogen decarboxylase n=541 Tax=cellular organisms RepID=DCUP_ECO24 rbh
NECEvent2014_5_7_scaffold_528_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2382..3155)
DNA (774bp) protein (258aa)
NADH pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016168}; EC=3.6.1.22 {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016202};; TaxID=749549 species="Bacteria; Pr
NADH pyrophosphatase n=112 Tax=Enterobacteriaceae RepID=NUDC_ECOLU rbh
nudC; NADH pyrophosphatase rbh
NECEvent2014_5_7_scaffold_528_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3250..3726
DNA (477bp) protein (159aa)
Regulator of sigma D n=964 Tax=Enterobacteriaceae RepID=RSD_ECO24 rbh
regulator of RpoD, Rsd/AlgQ
Regulator of sigma D {ECO:0000256|HAMAP-Rule:MF_01181, ECO:0000256|SAAS:SAAS00010112}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esch
NECEvent2014_5_7_scaffold_528_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3959..5854
DNA (1896bp) protein (632aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidi
Phosphomethylpyrimidine synthase n=77 Tax=Escherichia coli RepID=THIC_ECOLU rbh
thiC; thiamine biosynthesis protein ThiC
NECEvent2014_5_7_scaffold_528_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5854..6489
DNA (636bp) protein (212aa)
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
Thiamine-phosphate synthase n=75 Tax=Escherichia coli RepID=B7NFT4_ECOLU rbh
NECEvent2014_5_7_scaffold_528_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6482..7237
DNA (756bp) protein (252aa)
Thiamin (Thiazole moiety) biosynthesis protein n=88 Tax=Escherichia coli RepID=B7NFT3_ECOLU rbh
thiF; thiamin (thiazole moiety) biosynthesis protein
Thiazole biosynthesis adenylyltransferase ThiF {ECO:0000313|EMBL:ESA95290.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
NECEvent2014_5_7_scaffold_528_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7221..7421
DNA (201bp) protein (67aa)
Escherichia coli IMT2125 genomic chromosome, IMT2125 n=462 Tax=Escherichia coli RepID=J7QYE2_ECOLX
thiS; sulfur carrier protein ThiS
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EZD26126.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_5_7_scaffold_528_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7423..8193
DNA (771bp) protein (257aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacte
Thiazole synthase n=105 Tax=Escherichia coli RepID=THIG_ECOLU rbh
thiG; thiazole synthase rbh
NECEvent2014_5_7_scaffold_528_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8190..9323
DNA (1134bp) protein (378aa)
Thiamin biosynthesis ThiGH complex subunit n=96 Tax=Escherichia coli RepID=B7NFT0_ECOLU rbh
thiH; thiamine biosynthesis protein ThiH rbh
Thiamin biosynthesis ThiGH complex subunit {ECO:0000313|EMBL:CAR15637.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
NECEvent2014_5_7_scaffold_528_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9733..10272)
DNA (540bp) protein (180aa)
Heat shock protein n=85 Tax=Escherichia coli RepID=B7NFS9_ECOLU rbh
htrC; heat shock protein C rbh
Putative heat shock protein {ECO:0000313|EMBL:ESA95286.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_5_7_scaffold_528_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10486..13641)
DNA (3156bp) protein (1052aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' n=1 Tax=Escherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1) RepID=C9QV89_ECOD1
DNA-directed RNA polymerase subunit beta'
Displaying 13 items

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