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NECEvent2014_5_7_scaffold_577

Alias: 175_006_scaffold_577

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_7_scaffold_577_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(72..815)
DNA (744bp) protein (248aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=L3HF11_ECOLX rbh
putative ERCC4-like helicase rbh
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:EFJ72166.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_5_7_scaffold_577_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1050..2273)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=73 Tax=Escherichia coli RepID=B7N6L3_ECOLU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFJ72168.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_7_scaffold_577_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2266..3252)
DNA (987bp) protein (329aa)
Uncharacterized protein n=71 Tax=Escherichia coli RepID=B7N6L2_ECOLU rbh
hypothetical protein
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EFJ72169.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_5_7_scaffold_577_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3925..5994)
DNA (2070bp) protein (690aa)
Uncharacterized protein n=73 Tax=Escherichia coli RepID=B7N6L1_ECOLU rbh
Uncharacterized protein {ECO:0000313|EMBL:EHP66882.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
NECEvent2014_5_7_scaffold_577_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6030..6245)
DNA (216bp) protein (72aa)
Transcriptional regulator, AlpA family n=74 Tax=Escherichia coli RepID=D7XC43_ECOLX
Transcriptional regulator, AlpA family {ECO:0000313|EMBL:EFJ72172.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
hypothetical protein
NECEvent2014_5_7_scaffold_577_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6580..6972)
DNA (393bp) protein (131aa)
Uncharacterized protein n=76 Tax=Escherichia coli RepID=B7N6L0_ECOLU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFJ72173.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_7_scaffold_577_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7181..7720)
DNA (540bp) protein (180aa)
Uncharacterized protein n=75 Tax=Escherichia coli RepID=B7N6K9_ECOLU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFJ72174.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_7_scaffold_577_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8172..9344
DNA (1173bp) protein (391aa)
Uncharacterized protein n=75 Tax=Escherichia coli RepID=B7N6K8_ECOLU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFJ72175.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_7_scaffold_577_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9694..10338)
DNA (645bp) protein (215aa)
Predicted protein n=66 Tax=Escherichia coli RepID=D7JSF3_ECOLX rbh
Uncharacterized protein {ECO:0000313|EMBL:EHP66877.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
NECEvent2014_5_7_scaffold_577_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10340..11587)
DNA (1248bp) protein (416aa)
Prophage CP4-57 integrase n=73 Tax=Escherichia coli RepID=B7N6K6_ECOLU rbh
prophage CP4-57 integrase
Putative prophage CP4-57 integrase {ECO:0000313|EMBL:ESA93825.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_5_7_scaffold_577_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12215..12697)
DNA (483bp) protein (161aa)
SsrA-binding protein n=1351 Tax=Enterobacteriaceae RepID=SSRP_ECO24 rbh
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; Small protein B {ECO:0000256|HAMAP-Rule:MF_00023}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteoba
NECEvent2014_5_7_scaffold_577_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12829..13305
DNA (477bp) protein (159aa)
Ribosome association toxin RatA n=372 Tax=Enterobacteriaceae RepID=RATA_ECOLI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELD98286.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_577_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13295..13585
DNA (291bp) protein (97aa)
Protein RnfH n=120 Tax=Escherichia coli RepID=RNFH_ECO7I
hypothetical protein
UPF0125 protein A1UC_03311 {ECO:0000256|HAMAP-Rule:MF_00460}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
NECEvent2014_5_7_scaffold_577_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13647..13988)
DNA (342bp) protein (114aa)
Outer membrane protein assembly factor BamE n=1339 Tax=Enterobacteriaceae RepID=BAME_ECOL6
OmlA family protein
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteri
NECEvent2014_5_7_scaffold_577_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14137..15798)
DNA (1662bp) protein (554aa)
DNA repair protein RecN n=85 Tax=Escherichia coli RepID=B7N6K1_ECOLU rbh
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1116072 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriale
recN; recombination and repair protein
NECEvent2014_5_7_scaffold_577_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15884..16762)
DNA (879bp) protein (293aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-
inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Escherichia coli RepID=UPI0002BAA0D2 rbh
inorganic polyphosphate/ATP NAD kinase
NECEvent2014_5_7_scaffold_577_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16885..17316
DNA (432bp) protein (144aa)
Protein GrpE n=2 Tax=Shigella flexneri RepID=F7RD08_SHIFL
grpE; heat shock protein HSP70 cofactor
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria;
NECEvent2014_5_7_scaffold_577_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17371..18612)
DNA (1242bp) protein (414aa)
UPF0053 inner membrane protein yfjD n=102 Tax=Enterobacteriaceae RepID=E2QQ69_ECOLX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMX34776.1}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_577_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18678..19544)
DNA (867bp) protein (289aa)
Uncharacterized protein n=84 Tax=Escherichia coli RepID=B7N6J7_ECOLU rbh
ypjD; hypothetical protein rbh
Inner membrane protein YpjD {ECO:0000313|EMBL:EGI40183.1}; TaxID=656444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_5_7_scaffold_577_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19636..20997
DNA (1362bp) protein (454aa)
Signal recognition particle protein n=1280 Tax=Enterobacteriaceae RepID=SRP54_ECO57 rbh
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enter
NECEvent2014_5_7_scaffold_577_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


21246..21494
DNA (249bp) protein (83aa)
30S ribosomal protein S16 n=1441 Tax=Enterobacteriaceae RepID=RS16_ECO24
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=869678 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_5_7_scaffold_577_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21513..22061
DNA (549bp) protein (183aa)
Ribosome maturation factor RimM n=1393 Tax=Enterobacteriaceae RepID=RIMM_SHIBS rbh
rimM; 16S rRNA-processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteria
Displaying 22 items

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