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NECEvent2014_5_7_scaffold_626

Alias: 175_006_scaffold_626

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_7_scaffold_626_1
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1263)
DNA (1263bp) protein (421aa)
30S ribosomal protein S1 n=1 Tax=Escherichia coli SWW33 RepID=N2CBN6_ECOLX
rpsA; ribosomal protein RpsA
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydi
NECEvent2014_5_7_scaffold_626_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1374..2057)
DNA (684bp) protein (228aa)
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
Cytidylate kinase n=1349 Tax=Enterobacteriaceae RepID=KCY_ECO24 rbh
NECEvent2014_5_7_scaffold_626_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2230..2994)
DNA (765bp) protein (255aa)
Peptidase, M48 family n=86 Tax=Escherichia coli RepID=D7XFY9_ECOLX rbh
ycaL; putative lipoprotein with metallohydrolase domain rbh
Metalloprotease {ECO:0000313|EMBL:EQX89506.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA
NECEvent2014_5_7_scaffold_626_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3164..4447)
DNA (1284bp) protein (428aa)
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19) rbh
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
3-phosphoshikimate 1-carboxyvinyltransferase n=85 Tax=Escherichia coli RepID=AROA_ECOLU rbh
NECEvent2014_5_7_scaffold_626_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4518..5606)
DNA (1089bp) protein (363aa)
serC; phosphoserine aminotransferase (EC:2.6.1.52) rbh
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine
Phosphoserine aminotransferase n=81 Tax=Escherichia coli RepID=SERC_ECOLU rbh
NECEvent2014_5_7_scaffold_626_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5805..6497)
DNA (693bp) protein (231aa)
Uncharacterized protein ycaP n=409 Tax=Enterobacteriaceae RepID=E2QJB7_ECOLX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAR07135.1}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_7_scaffold_626_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6627..8387
DNA (1761bp) protein (587aa)
Uncharacterized protein n=87 Tax=Escherichia coli RepID=B7NAQ4_ECOLU rbh
30S ribosomal protein S12 methylthiotransferase {ECO:0000313|EMBL:ELE57095.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
ycaO; hypothetical protein rbh
NECEvent2014_5_7_scaffold_626_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8793..9650
DNA (858bp) protein (286aa)
Probable formate transporter 1 n=853 Tax=Enterobacteriaceae RepID=FOCA_ECO57 rbh
focA_2; formate transporter
Putative formate transporter 1 (Formate channel 1) {ECO:0000313|EMBL:EGI22259.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichi
NECEvent2014_5_7_scaffold_626_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9705..11285
DNA (1581bp) protein (527aa)
Pyruvate formate lyase I {ECO:0000313|EMBL:CAR12305.1}; EC=2.3.1.54 {ECO:0000313|EMBL:CAR12305.1};; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
pflB; pyruvate formate lyase I (EC:2.3.1.54)
Pyruvate formate lyase I n=119 Tax=Enterobacteriaceae RepID=B7NAQ2_ECOLU
Displaying 9 items

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