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NECEvent2014_5_7_scaffold_279_20

Organism: NECEvent2014_5_7_Escherichia_coli_50_56_partial

partial RP 29 / 55 MC: 4 BSCG 28 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(19445..20404)

Top 3 Functional Annotations

Value Algorithm Source
YibQ protein n=83 Tax=Escherichia coli RepID=D6IW52_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 319.0
  • Bit_score: 635
  • Evalue 2.50e-179
  • rbh
putative polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 319.0
  • Bit_score: 634
  • Evalue 1.60e-179
  • rbh
Putative polysaccharide deacetylase {ECO:0000313|EMBL:CBG36747.1}; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 319.0
  • Bit_score: 634
  • Evalue 7.80e-179

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
TTGTTTCCATTTCGTCGTAACGTTCTTGCATTTGCCGCTCTGTTGGCGCTCTCCTCCCCCGTAATTGCTGGCAAGCTTGCCATCGTCATTGATGATTTTGGGTATCGCCCGCACAACGAAAACCAGGTGCTGGCGATGCCTTCCGCTATATCCGTCGCTGTATTACCCGATTCACCGCACGCCAGAGAGATGGCGACCAAAGCGCATAACAGCGGTCACGAAGTGTTGATTCATCTACCGATGGCACCACTGAGTAAACAGCCGCTGGAGAAAAATACGCTACGCCCGGAGATGAGCAGCGACGAAATTGAGCGCATTATTCGTAGTGCGGTCAATAACGTGCCCTATGCCGTGGGGATCAACAACCACATGGGCAGCAAGATGACCTCTAACCTGTTTGGTATGCAGAAAGTGATGCAGGCGCTGGAGCGTTACAATCTTTACTTCCTCGACAGCGTAACCATCGGTAATACCCAGGCGATGCGCGCAGCGCAAGGCACTGGCGTGAAGGTGATCAAACGGAAAGTGTTCCTCGACGATTCGCAAAATGAAGCGGACATCCGTGTGCAATTCAATCGCGCAATTGACCTGGCACGTCGCAACGGTTCGACCATTGCCATTGGGCATCCTCACCCTTCCACGGTACGCGTGTTACAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGCAGGTTGATACGTCTACACCGCCGAAAAACACTGTGCCCGACACACCGCGTAATCCGTTCCGTGGCGTGAAGCTCTGCAAACCGAAGAAACCGCTGGAACCTGTTTATGCTAATCGCTTCTTTGAAGTATTAAGCGAAAGCATCAGCCAGAGCACGCTGATCGTTTACTTCCAGCATCAGTGGCAAGGCTGGGGCAAACAGCCTGAAGCGGCGAAGCTTAACGCTAGCGTAAATTAA
PROTEIN sequence
Length: 320
LFPFRRNVLAFAALLALSSPVIAGKLAIVIDDFGYRPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPPDITLVKASSLLNEPQVDTSTPPKNTVPDTPRNPFRGVKLCKPKKPLEPVYANRFFEVLSESISQSTLIVYFQHQWQGWGKQPEAAKLNASVN*