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NECEvent2014_5_7_scaffold_279

Alias: 175_006_scaffold_279

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_7_scaffold_279_1
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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59..226
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=2069 Tax=Enterobacteriaceae RepID=RL33_CITK8
rpmG; 50S ribosomal subunit protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1412525 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonel
NECEvent2014_5_7_scaffold_279_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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324..1133
DNA (810bp) protein (270aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule
Formamidopyrimidine-DNA glycosylase n=921 Tax=Enterobacteriaceae RepID=FPG_ECO24 rbh
mutM; formamidopyrimidine-DNA glycosylase
NECEvent2014_5_7_scaffold_279_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1172..1651)
DNA (480bp) protein (160aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyr
Phosphopantetheine adenylyltransferase n=552 Tax=Escherichia RepID=COAD_ECO45 rbh
coad; Phosphopantetheine adenylyltransferase
NECEvent2014_5_7_scaffold_279_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1659..2936)
DNA (1278bp) protein (426aa)
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:EFJ73656.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFJ73656.1};; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacter
3-deoxy-D-manno-octulosonic-acid transferase n=127 Tax=Escherichia coli RepID=B1LK70_ECOSM rbh
3-deoxy-D-manno-octulosonic-acid transferase
NECEvent2014_5_7_scaffold_279_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3349..4407
DNA (1059bp) protein (353aa)
Lipopolysaccharide core biosynthesis protein n=84 Tax=Escherichia coli RepID=B7NET6_ECOLU rbh
waaQ; lipopolysaccharide core biosynthesis protein rbh
Lipopolysaccharide core biosynthesis protein {ECO:0000313|EMBL:CAR15287.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
NECEvent2014_5_7_scaffold_279_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4404..5528
DNA (1125bp) protein (375aa)
Glucosyltransferase I n=92 Tax=Escherichia coli RepID=B7NET5_ECOLU rbh
waaG; glucosyltransferase I
RfaG glucosyltransferase I {ECO:0000313|EMBL:ESD33079.1}; TaxID=1268989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_5_7_scaffold_279_7
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5521..6318
DNA (798bp) protein (266aa)
Lipopolysaccharide core heptose(I) kinase {ECO:0000256|PIRNR:PIRNR037318}; EC=2.7.1.- {ECO:0000256|PIRNR:PIRNR037318};; TaxID=1432547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobact
Kinase that phosphorylates core heptose of lipopolysaccharide n=82 Tax=Escherichia coli RepID=B7NET4_ECOLU rbh
waaP; kinase that phosphorylates core heptose of lipopolysaccharide rbh
NECEvent2014_5_7_scaffold_279_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6361..7368
DNA (1008bp) protein (336aa)
rfaI; Lipopolysaccharide 1,3-galactosyltransferase (EC:2.4.1.44)
Lipopolysaccharide 1,3-galactosyltransferase n=87 Tax=Escherichia coli RepID=B7NET3_ECOLU rbh
Glycosyltransferase, family 8 {ECO:0000313|EMBL:ESA95203.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_5_7_scaffold_279_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7394..8101
DNA (708bp) protein (236aa)
Lipopolysaccharide core biosynthesis protein rfaY n=86 Tax=Escherichia coli RepID=B7NET2_ECOLU rbh
rfaY; lipopolysaccharide core biosynthesis protein
Lipopolysaccharide core biosynthesis protein RfaY {ECO:0000313|EMBL:EFJ73651.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
NECEvent2014_5_7_scaffold_279_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8126..9139
DNA (1014bp) protein (338aa)
rfaJ; UDP-glucose:(galactosyl) LPS alpha-1,2-glucosyltransferase (EC:2.4.1.58) rbh
Lipopolysaccharide 1,2-glucosyltransferase {ECO:0000313|EMBL:CAR15282.1}; EC=2.4.1.58 {ECO:0000313|EMBL:CAR15282.1};; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteri
Lipopolysaccharide 1,2-glucosyltransferase n=87 Tax=Escherichia coli RepID=B7NET1_ECOLU rbh
NECEvent2014_5_7_scaffold_279_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9148..10290
DNA (1143bp) protein (381aa)
rfaK; Lipopolysaccharide 1,2-N-acetylglucosaminetransferase (EC:2.4.1.56)
Lipopolysaccharide 1, 2-N-acetylglucosaminetransferase n=86 Tax=Escherichia coli RepID=B7NET0_ECOLU rbh
Uncharacterized protein {ECO:0000313|EMBL:EQX83868.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_7_scaffold_279_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10328..11536)
DNA (1209bp) protein (403aa)
O-antigen ligase n=86 Tax=Escherichia coli RepID=B7NES9_ECOLU rbh
rfaL; lipid A-core:surface polymer ligase
O-antigen ligase {ECO:0000313|EMBL:CAR15280.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:
NECEvent2014_5_7_scaffold_279_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11533..12525)
DNA (993bp) protein (331aa)
ADP-heptose:LPS heptosyl transferase I {ECO:0000313|EMBL:CAR15279.1}; EC=2.-.-.- {ECO:0000313|EMBL:CAR15279.1};; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
ADP-heptose:LPS heptosyl transferase I n=86 Tax=Escherichia coli RepID=B7NES8_ECOLU rbh
waaC; ADP-heptose:LPS heptosyl transferase I rbh
NECEvent2014_5_7_scaffold_279_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12529..13575)
DNA (1047bp) protein (349aa)
ADP-heptose:LPS heptosyltransferase II n=83 Tax=Escherichia coli RepID=B7NES7_ECOLU rbh
waaF; ADP-heptose:LPS heptosyltransferase II rbh
ADP-heptose-LPS heptosyltransferase 2 {ECO:0000313|EMBL:EQX83865.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_5_7_scaffold_279_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13585..14517)
DNA (933bp) protein (311aa)
rfaD; ADP-L-glycero-D-manno-heptose-6-epimerase (EC:5.1.3.20)
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|HAMAP-Rule:MF_01601, ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|HAMAP-Rule:MF_01601, ECO:0000256|SAAS:SAAS00055236};; ADP-L-glycero
ADP-L-glycero-D-manno-heptose-6-epimerase n=616 Tax=Enterobacteriaceae RepID=HLDD_ECO45 rbh
NECEvent2014_5_7_scaffold_279_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14806..15678
DNA (873bp) protein (291aa)
Protein YibB n=3 Tax=Escherichia coli RepID=L3F0N6_ECOLX rbh
Uncharacterized protein {ECO:0000313|EMBL:EFJ73644.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
htrL; Involved in lipopolysaccharide biosynthesis
NECEvent2014_5_7_scaffold_279_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15954..17150
DNA (1197bp) protein (399aa)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransfera
2-amino-3-ketobutyrate coenzyme A ligase n=727 Tax=Enterobacteriaceae RepID=KBL_ECO57 rbh
kbl; 2-amino-3-ketobutyrate CoA ligase
NECEvent2014_5_7_scaffold_279_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17160..18185
DNA (1026bp) protein (342aa)
tdh; L-threonine 3-dehydrogenase (EC:1.1.1.103) rbh
L-threonine 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053}; EC=1.1.1.103 {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053};; TaxID=1268986 species="Bac
L-threonine 3-dehydrogenase n=82 Tax=Escherichia coli RepID=TDH_ECOLU rbh
NECEvent2014_5_7_scaffold_279_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18424..19458
DNA (1035bp) protein (345aa)
Glycosyl transferase n=130 Tax=Escherichia coli RepID=D6IW53_ECOLX rbh
yibD; putative glycosyl transferase
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:ESA95214.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
NECEvent2014_5_7_scaffold_279_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19445..20404)
DNA (960bp) protein (320aa)
YibQ protein n=83 Tax=Escherichia coli RepID=D6IW52_ECOLX rbh
putative polysaccharide deacetylase rbh
Putative polysaccharide deacetylase {ECO:0000313|EMBL:CBG36747.1}; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_5_7_scaffold_279_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20408..21667)
DNA (1260bp) protein (420aa)
Protease with a role in cell division n=122 Tax=Escherichia coli RepID=B7NES0_ECOLU rbh
putative peptidase rbh
Murein hydrolase activator EnvC {ECO:0000313|EMBL:KDW82625.1}; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_5_7_scaffold_279_22
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21701..23245)
DNA (1545bp) protein (515aa)
phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=2 Tax=Escherichia coli RepID=U9XS72_ECOLX rbh
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosp
NECEvent2014_5_7_scaffold_279_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23490..23921
DNA (432bp) protein (144aa)
Uncharacterized protein YibN n=1279 Tax=Enterobacteriaceae RepID=YIBN_ECO57
yibN; hypothetical protein
Putative Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:EGI19337.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
NECEvent2014_5_7_scaffold_279_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24064..24315
DNA (252bp) protein (84aa)
Glutaredoxin 3 n=72 Tax=Escherichia coli RepID=B7NER7_ECOLU
grxC; glutaredoxin 3
Glutaredoxin 3 {ECO:0000313|EMBL:EFJ73636.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198
NECEvent2014_5_7_scaffold_279_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24378..24845
DNA (468bp) protein (156aa)
Protein-export protein SecB n=977 Tax=Enterobacteriaceae RepID=SECB_ECO24 rbh
protein-export protein SecB
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_5_7_scaffold_279_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24845..25864
DNA (1020bp) protein (340aa)
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=72 Tax=Escherichia coli RepID=GPDA_ECOLU rbh
NECEvent2014_5_7_scaffold_279_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25944..26765
DNA (822bp) protein (274aa)
cysE; serine acetyltransferase (EC:2.3.1.30)
Serine O-acetyltransferase {ECO:0000313|EMBL:KDY98054.1}; EC=2.3.1.30 {ECO:0000313|EMBL:KDY98054.1};; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobac
Serine acetyltransferase n=1372 Tax=Enterobacteriaceae RepID=CYSE_ECO57 rbh
NECEvent2014_5_7_scaffold_279_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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26848..26988
DNA (141bp) protein (47aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=S1LV46_ECOLX
putative transposase A, IS1397
Uncharacterized protein {ECO:0000313|EMBL:EHP62692.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
Displaying 28 items

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