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NECEvent2014_5_7_scaffold_763

Alias: 175_006_scaffold_763

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_7_scaffold_763_1
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..188)
DNA (186bp) protein (62aa)
Binding--dependent transport system inner membrane component family protein n=2 Tax=Clostridium sordellii RepID=T0EAA7_CLOSO
ABC transporter spermidine/putrescine permease {ECO:0000313|EMBL:CEK29350.1}; Uncharacterized protein {ECO:0000313|EMBL:CEK32711.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales
spermidine/putrescine ABC transporter permease
NECEvent2014_5_7_scaffold_763_2
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(191..1234)
DNA (1044bp) protein (348aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridi
Polyamine ABC transporter, ATP-binding family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0D274_CLOSO rbh
potA; spermidine/putrescine ABC transporter ATP-binding protein
NECEvent2014_5_7_scaffold_763_3
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1253..1792)
DNA (540bp) protein (180aa)
Helix-turn-helix family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0D1R8_CLOSO rbh
Transcriptional regulator {ECO:0000313|EMBL:CEQ26927.1}; Uncharacterized protein {ECO:0000313|EMBL:CEK32713.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcace
transcriptional regulator
NECEvent2014_5_7_scaffold_763_4
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2095..2853)
DNA (759bp) protein (253aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomera
nagB; glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase n=2 Tax=Clostridium sordellii RepID=T0CSM1_CLOSO rbh
NECEvent2014_5_7_scaffold_763_5
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2873..4000)
DNA (1128bp) protein (376aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1505 species="B
nagA; N-acetylglucosamine-6-phosphate deacetylase(GlcNAc 6-P deacetylase) (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0E5L7_CLOSO rbh
NECEvent2014_5_7_scaffold_763_6
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4012..4746)
DNA (735bp) protein (245aa)
Bacterial regulatory s, gntR family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0EAA2_CLOSO rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:CEQ08399.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium
GntR-family transcriptional regulator
NECEvent2014_5_7_scaffold_763_7
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4946..5788
DNA (843bp) protein (281aa)
S1 RNA binding domain protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0D269_CLOSO rbh
S1 RNA binding domain {ECO:0000313|EMBL:CEQ12590.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
NECEvent2014_5_7_scaffold_763_8
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5809..6168)
DNA (360bp) protein (120aa)
Putative lipoprotein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0D1R0_CLOSO
Uncharacterised protein {ECO:0000313|EMBL:CEP95237.1}; Uncharacterized protein {ECO:0000313|EMBL:CEK32718.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
NECEvent2014_5_7_scaffold_763_9
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6307..7617)
DNA (1311bp) protein (437aa)
Cellobiose-6-phosphate hydrolase {ECO:0000313|EMBL:CEN26021.1}; EC=3.2.1.86 {ECO:0000313|EMBL:CEN26021.1};; Cellobiose-6-phosphate hydrolase, family 4,6-phospho-beta-glucosidase,alpha-galactosidase,Fa
6-phospho-beta-glucosidase n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CSL6_CLOSO rbh
celF; 6-phospho-beta-glucosidase
NECEvent2014_5_7_scaffold_763_10
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7641..8879)
DNA (1239bp) protein (413aa)
PTS system, lactose/cellobiose IIC component family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0E5L1_CLOSO rbh
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
celB; PTS system lichenan-specific transporter subunit IIC
Displaying 10 items

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