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NECEvent2014_5_7_scaffold_420_12

Organism: NECEvent2014_5_7_Peptoclostridium_sordelli-rel_28_6

near complete RP 49 / 55 MC: 2 BSCG 50 / 51 MC: 3 ASCG 13 / 38
Location: 10368..11252

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix , lysR family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CVC8_CLOSO similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 294.0
  • Bit_score: 575
  • Evalue 3.70e-161
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:CEN77325.1}; Uncharacterized protein {ECO:0000313|EMBL:CEK36211.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptost similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 294.0
  • Bit_score: 576
  • Evalue 3.00e-161
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 293.0
  • Bit_score: 338
  • Evalue 1.60e-90

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Taxonomy

[Clostridium] sordellii → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 885
TTGATAGAAGAATTTAAAACTTTTATAGCTGTTGTGGAACATCAAAACTTTACTAAAGCAGGAGAAAGTATAAATTTATCTCAACCAACAGTGAGTACCCATATTAAAAATCTAGAAATTTATTTTAATACAACTCTTATAAACAGGTCGATTAAGCAAAAAACTATTTCTATAACGGATAACGGATATCTTTTATATAAAAGAGCACGTGAAATAATAAGTTCAATAGAATCTATTAAAGATGAAATAAATAGTATTTCTAACTCTATAAAAGGACACATAAAAATAGGAACTAGCCTTACGATAGCAGAATATTTTTTACCTGATTTTTTATCTATATTTTCAACAAAATATCCTGATATAGAAATTGAAATGATAGTTGAAAATACACATAAAATTTGTGAAAAAGTTAAAAGTTCTAATTTAGATATAGGTCTTGTTGAAGGAAGCTTGTCTTCTTTTGATTTTAATCAAAACTTTTTTTATGAAGATAAAATGGTGTTAACTTTTTCGCCAAAGACTGAGATTGATCCTGAAAACTTCACTATTAATTCAGTAAAAAGTAAAAAATGGATTGTAAGAGAAGAAGGCTCAGGAACTAGAGAATATCTTAATATATTCTTAAGTAATAATAAAATAACACCTCTTCAAATAATGGTATTAGGAAGCAATCATGCAGTAAAAGAGGCTGTTAAAAATAACCTAGGTGTCTCTATAATATCTAAATTAGTTACAGATTCAGAAGGTGATTCTTTATGTACTGTTAATTTAAATGATACATATAATAGATATTTTTCATTTATCACTCCTAAAGGAATAAAATCTTCAAATACAACATCTCTATTTATAAATGAACTTGAAAAATATTCAAAATCAAGAAATTAA
PROTEIN sequence
Length: 295
LIEEFKTFIAVVEHQNFTKAGESINLSQPTVSTHIKNLEIYFNTTLINRSIKQKTISITDNGYLLYKRAREIISSIESIKDEINSISNSIKGHIKIGTSLTIAEYFLPDFLSIFSTKYPDIEIEMIVENTHKICEKVKSSNLDIGLVEGSLSSFDFNQNFFYEDKMVLTFSPKTEIDPENFTINSVKSKKWIVREEGSGTREYLNIFLSNNKITPLQIMVLGSNHAVKEAVKNNLGVSIISKLVTDSEGDSLCTVNLNDTYNRYFSFITPKGIKSSNTTSLFINELEKYSKSRN*