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NECEvent2014_5_7_scaffold_420

Alias: 175_006_scaffold_420

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_7_scaffold_420_1
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..708)
DNA (708bp) protein (236aa)
guaB; IMP dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=2 Tax=Clostridium sordellii RepID=T0D4T8_CLOSO
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
NECEvent2014_5_7_scaffold_420_2
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1092..1496)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CVE0_CLOSO
TIGR00299 family protein {ECO:0000313|EMBL:CEN85891.1}; Uncharacterized protein {ECO:0000313|EMBL:CEK36201.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcacea
hypothetical protein
NECEvent2014_5_7_scaffold_420_3
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1526..2260)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0E8H8_CLOSO rbh
TIGR00299 family protein {ECO:0000313|EMBL:CEQ13967.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
NECEvent2014_5_7_scaffold_420_4
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2280..3023)
DNA (744bp) protein (248aa)
NCAIR-mutase (PurE)-related protein {ECO:0000313|EMBL:CEP91729.1}; EC=5.4.99.18 {ECO:0000313|EMBL:CEP91729.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcace
AIR carboxylase family protein n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T0CWF3_CLOSO rbh
hypothetical protein
NECEvent2014_5_7_scaffold_420_5
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3228..4850)
DNA (1623bp) protein (541aa)
60 kDa chaperonin n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0D576_CLOSO rbh
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1505 species
groL; 60 kDa chaperonin (Protein Cpn60) (GroELprotein)
NECEvent2014_5_7_scaffold_420_6
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4874..5158)
DNA (285bp) protein (95aa)
10 kDa chaperonin n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0D4S9_CLOSO
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1505 species
10 kDa chaperonin
NECEvent2014_5_7_scaffold_420_7
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5352..6842)
DNA (1491bp) protein (497aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=1505 species="Bacteria; Firmicutes; C
Cardiolipin synthase n=2 Tax=Clostridium sordellii RepID=T0CVD3_CLOSO rbh
cls; cardiolipin synthetase
NECEvent2014_5_7_scaffold_420_8
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6857..7732)
DNA (876bp) protein (292aa)
HhH-GPD superbase excision DNA repair family protein n=2 Tax=Clostridium sordellii RepID=T0E8H3_CLOSO rbh
DNA glycosylase {ECO:0000313|EMBL:CEQ19273.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
DNA glycosylase
NECEvent2014_5_7_scaffold_420_9
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7898..8560
DNA (663bp) protein (221aa)
Deoxyguanosine kinase {ECO:0000313|EMBL:CEN77322.1}; EC=2.7.1.113 {ECO:0000313|EMBL:CEN77322.1};; Deoxyguanosine kinase,Deoxyguanosine kinase,thymidylate kinase,thymidylate kinase,Deoxynucleoside kina
Deoxyguanosine kinase n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0ECY3_CLOSO rbh
deoxyguanosine kinase
NECEvent2014_5_7_scaffold_420_10
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8553..9206
DNA (654bp) protein (218aa)
Deoxyadenosine/deoxycytidine kinase {ECO:0000313|EMBL:EPZ61308.1}; EC=2.7.1.76 {ECO:0000313|EMBL:EPZ61308.1};; TaxID=1292036 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococca
Deoxyadenosine/deoxycytidine kinase n=2 Tax=Clostridium sordellii RepID=T0D571_CLOSO rbh
deoxynucleoside kinase
NECEvent2014_5_7_scaffold_420_11
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9232..10236)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0D4S2_CLOSO rbh
Membrane protein {ECO:0000313|EMBL:CEQ25275.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
putative membrane protein
NECEvent2014_5_7_scaffold_420_12
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10368..11252
DNA (885bp) protein (295aa)
Bacterial regulatory helix-turn-helix , lysR family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CVC8_CLOSO rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:CEN77325.1}; Uncharacterized protein {ECO:0000313|EMBL:CEK36211.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptost
LysR family transcriptional regulator
NECEvent2014_5_7_scaffold_420_13
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11302..11886)
DNA (585bp) protein (195aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00078102}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=2 Tax=Clostridium sordellii RepID=T0E7R8_CLOSO rbh
NECEvent2014_5_7_scaffold_420_14
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11964..12866)
DNA (903bp) protein (301aa)
dihydroorotate dehydrogenase 1B (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0ECX9_CLOSO rbh
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule
NECEvent2014_5_7_scaffold_420_15
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12859..13551)
DNA (693bp) protein (231aa)
Dihydroorotate dehydrogenase electron transfer subunit {ECO:0000313|EMBL:CEQ25266.1}; EC=1.3.98.1 {ECO:0000313|EMBL:CEQ25266.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; P
Oxidoreductase NAD-binding domain protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0D565_CLOSO rbh
pyrK; dihydroorotate dehydrogenase electron transfer subunit
NECEvent2014_5_7_scaffold_420_16
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13551..14720)
DNA (1170bp) protein (390aa)
Dihydroorotase {ECO:0000313|EMBL:CEO30329.1}; EC=3.5.2.3 {ECO:0000313|EMBL:CEO30329.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;"
pyrC; dihydroorotase, multifunctional complex type (EC:3.5.2.3)
Dihydroorotase, multifunctional complex type domain protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0D4R5_CLOSO rbh
NECEvent2014_5_7_scaffold_420_17
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14707..15633)
DNA (927bp) protein (309aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1505 species="Bacte
Aspartate carbamoyltransferase n=3 Tax=Clostridium sordellii RepID=T0CVC3_CLOSO rbh
pyrB; aspartate carbamoyltransferase catalytic chain
NECEvent2014_5_7_scaffold_420_18
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15874..17082)
DNA (1209bp) protein (403aa)
Cell wall hydrolase {ECO:0000313|EMBL:CEO35627.1}; EC=3.4.-.- {ECO:0000313|EMBL:CEO35627.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridi
SH3 domain protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0E8G2_CLOSO rbh
cell wall hydrolase
Displaying 18 items

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