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NECEvent2014_5_7_scaffold_1398

Alias: 175_006_scaffold_1398

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_7_scaffold_1398_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..345)
DNA (345bp) protein (115aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonad
Ribosomal large subunit pseudouridine synthase D n=2 Tax=Pseudomonas aeruginosa RepID=U8FH38_PSEAI
rluD; 23S rRNA pseudouridine synthase D
NECEvent2014_5_7_scaffold_1398_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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491..1516
DNA (1026bp) protein (342aa)
Outer membrane protein assembly factor BamD n=117 Tax=Pseudomonas RepID=BAMD_PSEAE rbh
DNA uptake lipoprotein-like protein
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadacea
NECEvent2014_5_7_scaffold_1398_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1673..1918
DNA (246bp) protein (82aa)
Uncharacterized protein n=83 Tax=Pseudomonas PF6_PSEAI">RepID=I6SPF6_PSEAI
hypothetical protein
MYND finger {ECO:0000313|EMBL:AKE72172.1}; Putative membrane protein {ECO:0000313|EMBL:CEI15621.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR69968.1}; TaxID=287 species="Bacteria; Proteobacteria;
NECEvent2014_5_7_scaffold_1398_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1908..3500
DNA (1593bp) protein (531aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1441931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae;
Two-component sensor PilS n=17 Tax=Pseudomonas aeruginosa RepID=K1CGL8_PSEAI rbh
pilS; two-component sensor
NECEvent2014_5_7_scaffold_1398_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3515..4723
DNA (1209bp) protein (403aa)
Type 4 fimbriae expression regulatory protein PilR n=102 Tax=Pseudomonas RepID=PILR_PSEAE rbh
pilR; two-component response regulator
Two-component response regulator PilR {ECO:0000313|EMBL:AHW73250.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
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