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NECEvent2014_5_7_scaffold_1148_4

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(1244..1600)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 n=132 Tax=Pseudomonas RepID=RS13_PSEA8 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 238
  • Evalue 3.30e-60
30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 238
  • Evalue 9.20e-61
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aer similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 238
  • Evalue 4.60e-60

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 357
ATGGCCCGTATTGCAGGCGTCAACATTCCGGATAACAAGCACACTGTTATCTCGCTGACCTACATCTATGGTGTTGGTCGCACTACTGCTCAGAGCATCTGCGCAGCCACCGGCGTAAACCCGGCTGCCAAGATCAAGGACCTGAGCGACGAGCAGATCGATCAGCTGCGTAACGAAGTCGCGAAGATCACCACCGAAGGTGACCTGCGTCGCGAAATCAACATGAACATCAAGCGTCTGATGGACCTCGGTTGCTACCGCGGTCTGCGTCATCGTCGCGGTCTGCCGGTTCGCGGTCAGCGTACCAAGACCAACGCGCGTACCCGCAAGGGCCCGCGTAAGCCGATCCGCAAGTAA
PROTEIN sequence
Length: 119
MARIAGVNIPDNKHTVISLTYIYGVGRTTAQSICAATGVNPAAKIKDLSDEQIDQLRNEVAKITTEGDLRREINMNIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIRK*