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NECEvent2014_5_7_scaffold_1148

Alias: 175_006_scaffold_1148

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_7_scaffold_1148_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..176)
DNA (174bp) protein (58aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=131 Tax=Pseudomonas RepID=RPOA_PSEA7
NECEvent2014_5_7_scaffold_1148_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(199..819)
DNA (621bp) protein (207aa)
30S ribosomal protein S4 n=131 Tax=Pseudomonas RepID=RS4_PSEA8 rbh
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
NECEvent2014_5_7_scaffold_1148_3
Serpens flexibilis, Serpens, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(836..1225)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=143 Tax=Pseudomonadaceae RepID=RS11_AZOVD
SSU ribosomal protein S11p (S14e)
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=706570 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Serpens.;" source="Serpens flexibil
NECEvent2014_5_7_scaffold_1148_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1244..1600)
DNA (357bp) protein (119aa)
30S ribosomal protein S13 n=132 Tax=Pseudomonas RepID=RS13_PSEA8
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aer
NECEvent2014_5_7_scaffold_1148_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1731..1847)
DNA (117bp) protein (39aa)
50S ribosomal protein L36 1 n=132 Tax=Pseudomonas RepID=RL361_PSEA7
50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1441931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pse
NECEvent2014_5_7_scaffold_1148_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1876..3204)
DNA (1329bp) protein (443aa)
Protein translocase subunit SecY n=130 Tax=Pseudomonas RepID=SECY_PSEAE rbh
Preprotein translocase secY subunit
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
NECEvent2014_5_7_scaffold_1148_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3205..3639)
DNA (435bp) protein (145aa)
50S ribosomal protein L15 n=127 Tax=Pseudomonas RepID=RL15_PSEA7
LSU ribosomal protein L15p (L27Ae)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pse
NECEvent2014_5_7_scaffold_1148_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3643..3819)
DNA (177bp) protein (59aa)
50S ribosomal protein L30 n=130 Tax=Pseudomonas RepID=RL30_PSEA7
rpmD; 50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pse
NECEvent2014_5_7_scaffold_1148_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3822..4322)
DNA (501bp) protein (167aa)
30S ribosomal protein S5 n=132 Tax=Pseudomonas RepID=RS5_PSEA7 rbh
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseu
NECEvent2014_5_7_scaffold_1148_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4326..4676)
DNA (351bp) protein (117aa)
50S ribosomal protein L18 n=133 Tax=Pseudomonas RepID=RL18_PSEA7
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1441931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
NECEvent2014_5_7_scaffold_1148_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4687..5220)
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=133 Tax=Pseudomonas RepID=RL6_PSEA7 rbh
50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseu
NECEvent2014_5_7_scaffold_1148_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5232..5624)
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=134 Tax=Pseudomonas RepID=RS8_PSEA7
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302}; TaxID=208963 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas a
Displaying 12 items

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