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NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_1
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(90..1157)
DNA (1068bp) protein (356aa)
UPI0003D5B9DD related cluster n=1 Tax=unknown RepID=UPI0003D5B9DD rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF07705.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu rbh
ADP-ribosylglycohydrolase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_2
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1154..2116)
DNA (963bp) protein (321aa)
UPI0003D5EB9E related cluster n=1 Tax=unknown RepID=UPI0003D5EB9E rbh
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:KGF07706.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source rbh
cation diffusion facilitator family transporter
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_3
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2244..2702)
DNA (459bp) protein (153aa)
UPI0003D5912A related cluster n=1 Tax=unknown RepID=UPI0003D5912A
Uncharacterized protein {ECO:0000313|EMBL:KGF07707.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2686..4008)
DNA (1323bp) protein (441aa)
UPI0003D5DDD8 related cluster n=1 Tax=unknown RepID=UPI0003D5DDD8 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI88011.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv rbh
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3975..4382)
DNA (408bp) protein (136aa)
UPI0003D5F338 related cluster n=1 Tax=unknown RepID=UPI0003D5F338
Uncharacterized protein {ECO:0000313|EMBL:ETI88010.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4369..4890)
DNA (522bp) protein (174aa)
UPI0003D5A686 related cluster n=1 Tax=unknown RepID=UPI0003D5A686 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI88009.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv rbh
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_7
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4883..5254)
DNA (372bp) protein (124aa)
UPI0003D5BB85 related cluster n=1 Tax=unknown RepID=UPI0003D5BB85
Uncharacterized protein {ECO:0000313|EMBL:KGF07711.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_8
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5251..5715)
DNA (465bp) protein (155aa)
UPI0003D5EEC1 related cluster n=1 Tax=unknown RepID=UPI0003D5EEC1
Uncharacterized protein {ECO:0000313|EMBL:KGF07712.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_9
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5708..6340)
DNA (633bp) protein (211aa)
UPI0003D601A2 related cluster n=1 Tax=unknown RepID=UPI0003D601A2 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF07713.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu rbh
hypothetical protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6337..6720)
DNA (384bp) protein (128aa)
UPI0003D5E785 related cluster n=1 Tax=unknown RepID=UPI0003D5E785
Uncharacterized protein {ECO:0000313|EMBL:ETI88005.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
general secretion pathway protein G
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_11
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6735..7913)
DNA (1179bp) protein (393aa)
UPI0003D5D1B2 related cluster n=1 Tax=unknown RepID=UPI0003D5D1B2 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF07715.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu rbh
pilC; type IV pilus assembly protein PilC
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_12
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7892..8926)
DNA (1035bp) protein (345aa)
UPI0003D5F0C6 related cluster n=1 Tax=unknown RepID=UPI0003D5F0C6 rbh
4-diphosphocytidyl-2C-methyl-D-erythritol kinase {ECO:0000313|EMBL:ETI88003.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source=" rbh
twitching motility protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_13
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8916..10067)
DNA (1152bp) protein (384aa)
UPI0003D61E8E related cluster n=1 Tax=unknown RepID=UPI0003D61E8E rbh
Type II secretion system protein E GspE {ECO:0000313|EMBL:ETI88002.1}; Flags: Fragment;; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" rbh
general secretory pathway protein E
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_14
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10387..11298)
DNA (912bp) protein (304aa)
UPI0003D68086 related cluster n=1 Tax=unknown RepID=UPI0003D68086 rbh
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativi rbh
protein-export membrane protein SecF
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_15
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11295..12521)
DNA (1227bp) protein (409aa)
UPI0003D5BFE9 related cluster n=1 Tax=unknown RepID=UPI0003D5BFE9 rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridi rbh
protein-export membrane protein SecD
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_16
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12545..13117)
DNA (573bp) protein (191aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillon rbh
UPI0003D679EF related cluster n=1 Tax=unknown RepID=UPI0003D679EF rbh
5-formyltetrahydrofolate cyclo-ligase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_17
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13110..13445)
DNA (336bp) protein (112aa)
UPI0003D5C976 related cluster n=1 Tax=unknown RepID=UPI0003D5C976
Preprotein translocase {ECO:0000313|EMBL:ETI87288.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivo
preprotein translocase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_18
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13528..14640)
DNA (1113bp) protein (371aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym rbh
UPI0003D5E75B related cluster n=1 Tax=unknown RepID=UPI0003D5E75B rbh
queuine tRNA-ribosyltransferase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_19
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14648..15664)
DNA (1017bp) protein (339aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; rbh
UPI0003D5D2C1 related cluster n=1 Tax=unknown RepID=UPI0003D5D2C1 rbh
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_20
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15679..17031)
DNA (1353bp) protein (451aa)
UPI0003D64778 related cluster n=1 Tax=unknown RepID=UPI0003D64778 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF07721.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu rbh
SpoIID/LytB domain protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_21
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17035..17241)
DNA (207bp) protein (69aa)
UPI0003D5AAC3 related cluster n=1 Tax=unknown RepID=UPI0003D5AAC3
Uncharacterized protein {ECO:0000313|EMBL:ETI87411.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_22
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17234..18271)
DNA (1038bp) protein (346aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenom rbh
UPI0003D65022 related cluster n=1 Tax=unknown RepID=UPI0003D65022 rbh
Holliday junction DNA helicase RuvB
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_23
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18274..18882)
DNA (609bp) protein (203aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID rbh
ruvA; putative Holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12)
UPI0003D5BEC4 related cluster n=1 Tax=unknown RepID=UPI0003D5BEC4 rbh
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_24
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18879..19376)
DNA (498bp) protein (166aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday rbh
UPI0003D5A6FD related cluster n=1 Tax=unknown RepID=UPI0003D5A6FD rbh
crossover junction endodeoxyribonuclease ruvC
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_25
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19524..20657)
DNA (1134bp) protein (378aa)
UPI0003D656A1 related cluster n=1 Tax=unknown RepID=UPI0003D656A1 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI87407.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv rbh
3D domain-containing protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_3_26
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20927..21895)
DNA (969bp) protein (323aa)
UPI0003D6706A related cluster n=1 Tax=unknown RepID=UPI0003D6706A
Uncharacterized protein {ECO:0000313|EMBL:KGF07725.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
TonB-dependent receptor plug
Displaying 26 items

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