ggKbase home page

NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7

Search features with annotation key words

Displaying items 331-360 of 462 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_331
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(363095..364792)
DNA (1698bp) protein (566aa)
UPI0003D69208 related cluster n=1 Tax=unknown RepID=UPI0003D69208 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF12297.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu rbh
S-layer protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_332
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

365275..365679
DNA (405bp) protein (135aa)
UPI0003D5FF99 related cluster n=1 Tax=unknown RepID=UPI0003D5FF99
Uncharacterized protein {ECO:0000313|EMBL:ETI88481.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
TM2 domain-containing protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_333
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(365840..367126)
DNA (1287bp) protein (429aa)
UPI0003D591F4 related cluster n=1 Tax=unknown RepID=UPI0003D591F4 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI88482.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv rbh
hypothetical protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_334
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(367803..368165)
DNA (363bp) protein (121aa)
DNA-damage-inducible protein D n=1 Tax=Peptostreptococcus anaerobius CAG:621 RepID=R5IZL6_9FIRM
DNA-damage-inducible protein D {ECO:0000313|EMBL:CCY47778.1}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;
DNA-damage-inducible protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_335
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(368314..369483)
DNA (1170bp) protein (390aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Clostridium leptum DSM 753 RepID=A7VX91_9CLOT rbh
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EDO60388.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium rbh
AAA domain (Cdc48 subfamily).
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_336
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(369480..370358)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VX92_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDO60389.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753 rbh
hypothetical protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_337
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(370367..371944)
DNA (1578bp) protein (526aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C374CF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY90995.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;" rbh
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_338
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(371902..372867)
DNA (966bp) protein (322aa)
XamI restriction endonuclease. (EC:3.1.21.4)
XamI restriction endonuclease {ECO:0000313|EMBL:CBK96821.1}; EC=3.1.21.4 {ECO:0000313|EMBL:CBK96821.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminic rbh
type II restriction endonuclease SalI n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C374D0 rbh
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_339
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(372879..373088)
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25559.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
transcriptional regulator
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_340
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(373295..374749)
DNA (1455bp) protein (485aa)
Relaxase/mobilization nuclease domain protein n=2 Tax=Firmicutes RepID=U7UUK5_9FIRM rbh
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:ERT62589.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasp rbh
hypothetical protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_341
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(375280..376815)
DNA (1536bp) protein (512aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO rbh
UPI0003D64ED5 related cluster n=1 Tax=unknown RepID=UPI0003D64ED5 rbh
GMP synthase [glutamine-hydrolyzing]
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_342
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(376891..377847)
DNA (957bp) protein (319aa)
UPI0003D60576 related cluster n=1 Tax=unknown RepID=UPI0003D60576 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF12301.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu rbh
exonuclease RNase T and DNA polymerase III
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_343
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(377844..378377)
DNA (534bp) protein (178aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146, ECO:0000256|SAAS:SAAS00054741}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_0
Deoxycytidine triphosphate deaminase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSU7_9CLOT
Deoxycytidine triphosphate deaminase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_344
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(378374..378832)
DNA (459bp) protein (153aa)
UPI0003D64035 related cluster n=1 Tax=unknown RepID=UPI0003D64035 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI87396.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv rbh
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_345
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

378958..380562
DNA (1605bp) protein (535aa)
UPI0003D68841 related cluster n=1 Tax=unknown RepID=UPI0003D68841 rbh
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; rbh
peptide chain release factor 3
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_346
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(381165..381902)
DNA (738bp) protein (246aa)
UPI0003D683F1 related cluster n=1 Tax=unknown RepID=UPI0003D683F1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF12305.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu rbh
hypothetical protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_347
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(382206..383633)
DNA (1428bp) protein (476aa)
UPI0003D61EE7 related cluster n=1 Tax=unknown RepID=UPI0003D61EE7 rbh
APC family amino acid-polyamine-organocation transporter {ECO:0000313|EMBL:ETI84996.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" rbh
rocC; amino acid permease rocC
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_348
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(383630..384067)
DNA (438bp) protein (146aa)
UPI0003D5D518 related cluster n=1 Tax=unknown RepID=UPI0003D5D518 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF12307.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu rbh
hypothetical protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_349
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(384118..385302)
DNA (1185bp) protein (395aa)
UPI0003D61352 related cluster n=1 Tax=unknown RepID=UPI0003D61352 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI84998.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv rbh
hypothetical protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_350
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(385313..386401)
DNA (1089bp) protein (363aa)
UPI0003D69717 related cluster n=1 Tax=unknown RepID=UPI0003D69717 rbh
Permease {ECO:0000313|EMBL:KGF12309.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;" rbh
Predicted permeases
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_351
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(386453..387178)
DNA (726bp) protein (242aa)
UPI0003D5E7C2 related cluster n=1 Tax=unknown RepID=UPI0003D5E7C2 rbh
ABC transporter {ECO:0000313|EMBL:ETI85000.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DO rbh
ABC transporter
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_352
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(387180..387887)
DNA (708bp) protein (236aa)
UPI0003D60D0A related cluster n=1 Tax=unknown RepID=UPI0003D60D0A rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF12311.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu rbh
OstA family protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_353
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(387884..388426)
DNA (543bp) protein (181aa)
UPI0003D69382 related cluster n=1 Tax=unknown RepID=UPI0003D69382 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF12312.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu rbh
hypothetical protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_354
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(388426..389346)
DNA (921bp) protein (307aa)
UPI0003D623A1 related cluster n=1 Tax=unknown RepID=UPI0003D623A1 rbh
Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase family protein {ECO:0000313|EMBL:ETI85003.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellace rbh
lipid A biosynthesis acyltransferase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_355
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(389360..389893)
DNA (534bp) protein (178aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family (EC:3.1.3.45)
UPI0003D5B542 related cluster n=1 Tax=unknown RepID=UPI0003D5B542 rbh
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family {ECO:0000313|EMBL:ETI85004.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativic rbh
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_356
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(389893..390864)
DNA (972bp) protein (324aa)
UPI0003D61308 related cluster n=1 Tax=unknown RepID=UPI0003D61308 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI85005.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv rbh
arabinose 5-phosphate isomerase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_357
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(390861..391688)
DNA (828bp) protein (276aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-man rbh
UPI0003D6369C related cluster n=1 Tax=unknown RepID=UPI0003D6369C rbh
2-dehydro-3-deoxyphosphooctonate aldolase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_358
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(391666..392433)
DNA (768bp) protein (256aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-k rbh
UPI0003D6461E related cluster n=1 Tax=unknown RepID=UPI0003D6461E rbh
3-deoxy-manno-octulosonate cytidylyltransferase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_359
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(392415..393533)
DNA (1119bp) protein (373aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO rbh
UPI0003D66883 related cluster n=1 Tax=unknown RepID=UPI0003D66883 rbh
tetraacyldisaccharide 4'-kinase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_360
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(393517..394848)
DNA (1332bp) protein (444aa)
UPI0003D61AC0 related cluster n=1 Tax=unknown RepID=UPI0003D61AC0 rbh
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:ETI85009.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Nega rbh
3-deoxy-D-manno-octulosonic-acid transferase
Displaying items 331-360 of 462 in total

View Taxonomy