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NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7

Search features with annotation key words

Displaying items 361-390 of 462 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_361
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(394850..396580)
DNA (1731bp) protein (577aa)
UPI0003D62EED related cluster n=1 Tax=unknown RepID=UPI0003D62EED rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGF12317.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridia rbh
lipid A export permease/ATP-binding protein MsbA
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_362
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(396573..397712)
DNA (1140bp) protein (380aa)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=1403945 species="B rbh
UPI0003D5AE0B related cluster n=1 Tax=unknown RepID=UPI0003D5AE0B rbh
lipid-A-disaccharide synthase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_363
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(397709..398533)
DNA (825bp) protein (275aa)
UPI0003D5F513 related cluster n=1 Tax=unknown RepID=UPI0003D5F513 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF12319.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu rbh
hypothetical protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_364
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(398850..399056)
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:KGF12324.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_365
unknown

Not on your lists

comp(399572..399736)
DNA (165bp) protein (55aa)

This feature has no annotations

NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_366
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(399787..400026)
DNA (240bp) protein (80aa)
UPI0003D5FC1B related cluster n=1 Tax=unknown RepID=UPI0003D5FC1B
Uncharacterized protein {ECO:0000313|EMBL:KGF12322.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_367
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(400061..400249)
DNA (189bp) protein (63aa)
UPI0003D6777D related cluster n=1 Tax=unknown RepID=UPI0003D6777D
Uncharacterized protein {ECO:0000313|EMBL:KGF12323.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_368
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(400497..401309)
DNA (813bp) protein (271aa)
UPI0003D689C6 related cluster n=1 Tax=unknown RepID=UPI0003D689C6 rbh
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMA rbh
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_369
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(401480..401938)
DNA (459bp) protein (153aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
UPI0003D65817 related cluster n=1 Tax=unknown RepID=UPI0003D65817
3-hydroxyacyl-ACP dehydratase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_370
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(401935..402783)
DNA (849bp) protein (283aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS0004138 rbh
UPI0003D5C2F7 related cluster n=1 Tax=unknown RepID=UPI0003D5C2F7 rbh
UDP-3-0-acyl N-acetylglucosamine deacetylase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_371
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(402905..404155)
DNA (1251bp) protein (417aa)
UPI0003D62FA7 related cluster n=1 Tax=unknown RepID=UPI0003D62FA7 rbh
Aminotransferase {ECO:0000313|EMBL:KGF12328.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A1 rbh
aminotransferase class I and II
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_372
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(404311..406095)
DNA (1785bp) protein (595aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incerta rbh
UPI0003D5C562 related cluster n=1 Tax=unknown RepID=UPI0003D5C562 rbh
histidine kinase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_373
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(406092..406775)
DNA (684bp) protein (228aa)
UPI0003D5E5FD related cluster n=1 Tax=unknown RepID=UPI0003D5E5FD rbh
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGF12330.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostrid rbh
two component transcriptional regulator, winged helix family
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_374
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(406782..407423)
DNA (642bp) protein (214aa)
UPI0003D5CBF3 related cluster n=1 Tax=unknown RepID=UPI0003D5CBF3 rbh
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Se rbh
phosphate uptake regulator PhoU
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_375
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(407467..408222)
DNA (756bp) protein (252aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran rbh
pstB; ABC transporter ATPase (EC:3.6.3.27)
UPI0003D641C6 related cluster n=1 Tax=unknown RepID=UPI0003D641C6 rbh
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_376
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(408224..409060)
DNA (837bp) protein (279aa)
UPI0003D6229D related cluster n=1 Tax=unknown RepID=UPI0003D6229D rbh
Phosphate ABC transporter membrane protein 2, PhoT family {ECO:0000313|EMBL:ETI89428.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" rbh
phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1)
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_377
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(409057..409920)
DNA (864bp) protein (288aa)
UPI0003D62BF8 related cluster n=1 Tax=unknown RepID=UPI0003D62BF8 rbh
Phosphate ABC transporter permease {ECO:0000313|EMBL:KGF12334.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridial rbh
pstC; phosphate ABC transporter permease PstC
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_378
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(409951..410853)
DNA (903bp) protein (301aa)
UPI0003D659F2 related cluster n=1 Tax=unknown RepID=UPI0003D659F2 rbh
Phosphate ABC transporter substrate-binding protein, PhoT family {ECO:0000313|EMBL:ETI89430.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativico rbh
phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1)
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_379
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(411231..413093)
DNA (1863bp) protein (621aa)
UPI0003D65C65 related cluster n=1 Tax=unknown RepID=UPI0003D65C65 rbh
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0 rbh
excinuclease ABC subunit C
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_380
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(413077..415938)
DNA (2862bp) protein (954aa)
UPI0003D658B0 related cluster n=1 Tax=unknown RepID=UPI0003D658B0 rbh
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0 rbh
excinuclease ABC subunit A
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_381
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(415952..418030)
DNA (2079bp) protein (693aa)
UPI0003D5955C related cluster n=1 Tax=unknown RepID=UPI0003D5955C rbh
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0 rbh
UvrABC system protein B
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_382
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(418642..419580)
DNA (939bp) protein (313aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UTN4_9FIRM rbh
Esterase {ECO:0000313|EMBL:KGF07210.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;" rbh
putative esterase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_383
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(419725..420549)
DNA (825bp) protein (275aa)
Ribosomal protein L11 methyltransferase-like protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7US83_9FIRM rbh
Methyltransferase type 11 {ECO:0000313|EMBL:KGF07209.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacter rbh
type 11 methyltransferase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_384
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(420597..421235)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Facklamia hominis ACS-120-V-Sch10 RepID=S3YQV6_9LACT rbh
Membrane protein {ECO:0000313|EMBL:KGF07208.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A1 rbh
hypothetical protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_385
Selenomonas sp. F0473, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

421487..422497
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Selenomonas sp. F0473 RepID=K9CXD1_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EKU71402.1}; TaxID=999423 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. F0473.;" rbh
transporter permease
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_386
Selenomonas sp. F0473, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

422497..423246
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Selenomonas sp. F0473 RepID=K9CKR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU71401.1}; TaxID=999423 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. F0473.;"
ABC transporter
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_387
Selenomonas sp. CM52, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(423412..424395)
DNA (984bp) protein (328aa)
Oligopeptide ABC transporter, oligopeptide-binding protein n=1 Tax=Selenomonas sp. CM52 RepID=J5VBD0_9FIRM rbh
Oligopeptide ABC transporter, oligopeptide-binding protein {ECO:0000313|EMBL:EJU28669.1}; TaxID=936381 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" so rbh
periplasmic binding protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_388

Not on your lists

comp(424690..426411)
DNA (1722bp) protein (574aa)
ABC transporter, ATP-binding protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UTI2_9FIRM rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETJ20554.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;" rbh
multidrug ABC transporter
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_389

Not on your lists

comp(426395..428149)
DNA (1755bp) protein (585aa)
ABC transporter, ATP-binding protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UR29_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:ETJ20553.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;" rbh
ABC transporter ATP-binding protein/permease
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_390
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

428312..429304
DNA (993bp) protein (331aa)
DNA-binding helix-turn-helix protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7US34_9FIRM rbh
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERT61694.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. rbh
AraC family transcriptional regulator
Displaying items 361-390 of 462 in total

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