ggKbase home page

NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_387

Organism: NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_plum

partial RP 52 / 55 BSCG 0 / 51 ASCG 12 / 38 MC: 1
Location: comp(423412..424395)

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide ABC transporter, oligopeptide-binding protein n=1 Tax=Selenomonas sp. CM52 RepID=J5VBD0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 332.0
  • Bit_score: 429
  • Evalue 2.80e-117
  • rbh
Oligopeptide ABC transporter, oligopeptide-binding protein {ECO:0000313|EMBL:EJU28669.1}; TaxID=936381 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 332.0
  • Bit_score: 429
  • Evalue 3.90e-117
  • rbh
periplasmic binding protein similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 326.0
  • Bit_score: 414
  • Evalue 3.40e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Selenomonas sp. CM52 → Selenomonas → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 984
ATGAAGAAGTGGTTATTGGGAACCGCTGTTGCCATGTCGGTCCTGGCATTGGCGGGATGTGGGGCTGATAAGCCGGCCACGACGGCGGAAGCGACAGGCTATCCGATCAAATGGGAAGAAAAACTGGACGGGAACACTTACCAGGAACAGGTAACCAAGGCACCGCAACGCGCAGTATCCATGTCGCAAGCGACAACGGAAATGTTGCTCGCCTTAGGTCTGGAAAAACAGATGGCGGGTACGGCGTTCAAAGAAGATGATATTTACGAACCGTTGCAAGCCGCGTATGAAAAAGTACCGGTATTGGCGGAAAAATGGCCGTCCTACGAAGTATTTATCGCAGCGAAACCGGACTTTACGACCGGTTGGCCGGTACCGTTCACCAAACGCGGTATCGAAGCGAGCAAGATTCGCGAAGCCGGTGTACCGATTTATGTACCGGATTCCATGCAGAAAGACGACGCGACCTTGGATACGCTGTTTGAAGATATGTTGACGATCGGCAAGATCTTCAACGCATCGGATAAAGCGGAAAAATGGGTAGCGGCACAGAAGAAACAGTTAGCAGCGGCACAGGAAAAATTGAAAAACTTGCCGGAAAAACGTGTCTTTGTGTTTGACTCGGAAGATGATCAGCCTTTTACCGTATTCGAAGGCTACACCACGAGCGTACTCAAACTGATCGGCGCGAAGAACGTCATGAGCGGTCTCGGTTCGGATAAAACTTGGGCCAAGGCAAGCTGGGAAGATGTCATCGCACAGGATCCGGAATATATCATCATCGTGGACTATGGCACGAGTATCCGCAATACGGCTGATTTCGACGCGAAAGTAGCGGCGTTGAAAGCAAATCCGGCGTTGCAGAATATGACGGCTGTCCGTGAAGGACATTTCATCCGCGTAAAACTTTCGGAAATCACACCGGGCGTACGCACGGTAGCGGCACTGGAACGTTTGGCGAAAGAAATTCACGGCTTGAAATAA
PROTEIN sequence
Length: 328
MKKWLLGTAVAMSVLALAGCGADKPATTAEATGYPIKWEEKLDGNTYQEQVTKAPQRAVSMSQATTEMLLALGLEKQMAGTAFKEDDIYEPLQAAYEKVPVLAEKWPSYEVFIAAKPDFTTGWPVPFTKRGIEASKIREAGVPIYVPDSMQKDDATLDTLFEDMLTIGKIFNASDKAEKWVAAQKKQLAAAQEKLKNLPEKRVFVFDSEDDQPFTVFEGYTTSVLKLIGAKNVMSGLGSDKTWAKASWEDVIAQDPEYIIIVDYGTSIRNTADFDAKVAALKANPALQNMTAVREGHFIRVKLSEITPGVRTVAALERLAKEIHGLK*