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NECEvent2014_5_8_UNK

In projects: NECEvent2014_5_8
Displaying items 101-150 of 213 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_8_scaffold_1248 175_008_scaffold_1248
Genus: Enterococcus (50%)
12 6806 bp 36.26 22.48 88.77
NECEvent2014_5_8_scaffold_5061 175_008_scaffold_5061
Species: Enterobacter sp. 35699 (50%)
4 1470 bp 45.17 5.31 88.57
NECEvent2014_5_8_scaffold_6121 175_008_scaffold_6121
Species: Enterobacter cloacae (100%)
2 1128 bp 55.76 3.86 88.30
NECEvent2014_5_8_scaffold_3921 175_008_scaffold_3921
Species: Caldicellulosiruptor bescii (100%)
1 2012 bp 30.72 28.55 88.27
NECEvent2014_5_8_scaffold_703 175_008_scaffold_703
Species: Klebsiella pneumoniae (100%)
7 11826 bp 43.02 7.20 88.10
NECEvent2014_5_8_scaffold_1263 175_008_scaffold_1263
Order: Enterobacteriales (90.91%)
11 6680 bp 51.08 6.89 87.57
NECEvent2014_5_8_scaffold_4412 175_008_scaffold_4412
Species: Enterobacter cloacae (100%)
2 1741 bp 54.68 6.38 87.54
NECEvent2014_5_8_scaffold_6175 175_008_scaffold_6175
Species: Enterobacter asburiae (50%)
2 1115 bp 54.35 13.99 87.17
NECEvent2014_5_8_scaffold_6515 175_008_scaffold_6515
Species: [Clostridium] sordellii (100%)
1 1040 bp 31.54 2.88 87.12
NECEvent2014_5_8_scaffold_6199 175_008_scaffold_6199
Species: Enterobacter sp. 35683 (100%)
1 1109 bp 55.00 3.79 87.11
NECEvent2014_5_8_scaffold_3130 175_008_scaffold_3130
Species: Enterobacter cloacae (50%)
2 2612 bp 57.04 4.94 87.06
NECEvent2014_5_8_scaffold_2907 175_008_scaffold_2907
Species: Clostridium perfringens (100%)
2 2866 bp 28.75 5.29 86.99
NECEvent2014_5_8_scaffold_5769 175_008_scaffold_5769
Species: Peptoniphilus lacrimalis (50%)
2 1226 bp 28.22 4.89 86.87
NECEvent2014_5_8_scaffold_471 175_008_scaffold_471
Species: Klebsiella pneumoniae (83.33%)
18 18373 bp 52.48 8.10 86.80
NECEvent2014_5_8_scaffold_3793 175_008_scaffold_3793
Species: Klebsiella pneumoniae (100%)
1 2095 bp 54.51 5.87 86.78
NECEvent2014_5_8_scaffold_1686 175_008_scaffold_1686
Species: Eggerthella sp. HGA1 (50%)
6 5045 bp 45.31 6.63 85.99
NECEvent2014_5_8_scaffold_4163 175_008_scaffold_4163
Genus: Enterobacter (100%)
3 1864 bp 53.33 5.87 85.62
NECEvent2014_5_8_scaffold_5255 175_008_scaffold_5255
Species: Escherichia coli (100%)
2 1395 bp 54.48 6.77 85.59
NECEvent2014_5_8_scaffold_6090 175_008_scaffold_6090
Species: Bifidobacterium breve (100%)
2 1136 bp 58.71 3.17 85.56
NECEvent2014_5_8_scaffold_1324 175_008_scaffold_1324
Phylum: Firmicutes (80%)
5 6424 bp 28.44 20.34 85.41
NECEvent2014_5_8_scaffold_6606 175_008_scaffold_6606
Species: Bifidobacterium breve (100%)
2 1021 bp 56.32 3.23 85.21
NECEvent2014_5_8_scaffold_1359 175_008_scaffold_1359
Phylum: Firmicutes (50%)
6 6308 bp 26.08 16.19 84.94
NECEvent2014_5_8_scaffold_4628 175_008_scaffold_4628
Species: Enterococcus faecalis (50%)
4 1646 bp 39.13 5.10 84.93
NECEvent2014_5_8_scaffold_4663 175_008_scaffold_4663
Order: Clostridiales (66.67%)
3 1635 bp 33.46 3.30 84.77
NECEvent2014_5_8_scaffold_6564 175_008_scaffold_6564 3 1030 bp 60.58 3.20 84.76
NECEvent2014_5_8_scaffold_1639 175_008_scaffold_1639
Order: Enterobacteriales (60%)
5 5158 bp 36.84 35.30 84.51
NECEvent2014_5_8_scaffold_6244 175_008_scaffold_6244
Species: Klebsiella pneumoniae (50%)
2 1101 bp 48.59 142.78 84.47
NECEvent2014_5_8_scaffold_5020 175_008_scaffold_5020
Species: Eggerthella lenta (75%)
4 1483 bp 61.36 3.84 84.36
NECEvent2014_5_8_scaffold_5520 175_008_scaffold_5520
Class: Bacilli (66.67%)
3 1302 bp 31.72 4.38 84.10
NECEvent2014_5_8_scaffold_899 175_008_scaffold_899
Genus: Klebsiella (58.33%)
12 9270 bp 59.76 7.69 84.05
NECEvent2014_5_8_scaffold_3491 175_008_scaffold_3491
Genus: Enterobacter (66.67%)
3 2299 bp 52.59 12.07 84.04
NECEvent2014_5_8_scaffold_1285 175_008_scaffold_1285
Species: Escherichia coli (60%)
10 6570 bp 42.09 11.64 83.94
NECEvent2014_5_8_scaffold_5855 175_008_scaffold_5855
Species: Salmonella enterica (100%)
1 1198 bp 47.66 280.84 83.89
NECEvent2014_5_8_scaffold_2257 175_008_scaffold_2257
Class: Bacilli (60%)
5 3771 bp 39.38 5.93 83.77
NECEvent2014_5_8_scaffold_2570 175_008_scaffold_2570
Species: Clostridium celatum (50%)
2 3226 bp 30.87 29.25 83.70
NECEvent2014_5_8_scaffold_5607 175_008_scaffold_5607
Species: Roseburia inulinivorans (50%)
2 1280 bp 66.72 5.98 83.67
NECEvent2014_5_8_scaffold_5804 175_008_scaffold_5804
Species: Anaerococcus vaginalis (100%)
1 1217 bp 31.80 2.83 83.32
NECEvent2014_5_8_scaffold_3039 175_008_scaffold_3039
Order: Enterobacteriales (80%)
5 2708 bp 51.48 133.33 83.31
NECEvent2014_5_8_scaffold_5150 175_008_scaffold_5150 3 1436 bp 63.93 6.69 82.94
NECEvent2014_5_8_scaffold_357 175_008_scaffold_357
Order: Clostridiales (57.58%)
33 21463 bp 28.38 15.30 82.83
NECEvent2014_5_8_scaffold_5879 175_008_scaffold_5879
Order: Clostridiales (66.67%)
3 1192 bp 26.85 2.01 82.80
NECEvent2014_5_8_scaffold_5076 175_008_scaffold_5076
Species: Paenibacillus curdlanolyticus (50%)
2 1464 bp 32.79 5.64 82.79
NECEvent2014_5_8_scaffold_6477 175_008_scaffold_6477
Species: Clostridium sp. CAG:265 (100%)
1 1049 bp 23.16 8.15 82.36
NECEvent2014_5_8_scaffold_2778 175_008_scaffold_2778 10 3003 bp 60.71 6.94 81.02
NECEvent2014_5_8_scaffold_3260 175_008_scaffold_3260
Species: Clostridium perfringens (75%)
4 2487 bp 25.85 6.15 80.34
NECEvent2014_5_8_scaffold_4642 175_008_scaffold_4642
Species: Pseudomonas aeruginosa (50%)
4 1641 bp 61.61 5.12 80.26
NECEvent2014_5_8_scaffold_2166 175_008_scaffold_2166
Genus: Clostridium (62.5%)
8 3941 bp 29.38 11.88 80.08
NECEvent2014_5_8_scaffold_6309 175_008_scaffold_6309
Species: Enterobacter sp. 35683 (100%)
1 1079 bp 57.46 5.70 80.07
NECEvent2014_5_8_scaffold_5963 175_008_scaffold_5963
Species: Finegoldia magna (100%)
2 1173 bp 34.19 1.79 79.80
NECEvent2014_5_8_scaffold_6625 175_008_scaffold_6625
Species: Escherichia coli (100%)
1 1016 bp 51.77 8.42 79.43
Displaying items 101-150 of 213 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.