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NECEvent2014_5_8_UNK

In projects: NECEvent2014_5_8
Displaying items 151-200 of 213 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_8_scaffold_5931 175_008_scaffold_5931
Species: Bifidobacterium breve (100%)
2 1181 bp 60.12 2.79 78.75
NECEvent2014_5_8_scaffold_6703 175_008_scaffold_6703
Species: Enterobacter cloacae (66.67%)
3 1000 bp 53.30 4.50 78.30
NECEvent2014_5_8_scaffold_4739 175_008_scaffold_4739
Genus: Clostridium (75%)
4 1600 bp 24.56 13.88 77.81
NECEvent2014_5_8_scaffold_2251 175_008_scaffold_2251 5 3783 bp 26.99 16.81 77.64
NECEvent2014_5_8_scaffold_6157 175_008_scaffold_6157
Species: Enterobacter cloacae (50%)
2 1119 bp 51.92 6.17 77.48
NECEvent2014_5_8_scaffold_2940 175_008_scaffold_2940
Species: Klebsiella variicola (62.5%)
8 2823 bp 48.18 8.18 77.36
NECEvent2014_5_8_scaffold_2588 175_008_scaffold_2588
Species: Enterobacter cloacae (100%)
4 3207 bp 49.92 12.82 76.99
NECEvent2014_5_8_scaffold_5906 175_008_scaffold_5906
Species: Anoxybacillus flavithermus (50%)
2 1187 bp 30.75 5.69 76.83
NECEvent2014_5_8_scaffold_1214 175_008_scaffold_1214
Genus: Enterobacter (72.73%)
11 7054 bp 45.08 5.08 76.81
NECEvent2014_5_8_scaffold_4165 175_008_scaffold_4165
Species: Enterobacter cloacae (100%)
2 1864 bp 53.49 5.39 76.77
NECEvent2014_5_8_scaffold_3982 175_008_scaffold_3982
Species: Clostridium butyricum (50%)
2 1974 bp 27.41 19.30 76.75
NECEvent2014_5_8_scaffold_1642 175_008_scaffold_1642
Species: Escherichia coli (66.67%)
12 5153 bp 38.66 10.13 76.40
NECEvent2014_5_8_scaffold_6603 175_008_scaffold_6603
Species: Enterobacter cloacae (100%)
2 1021 bp 57.30 5.29 76.40
NECEvent2014_5_8_scaffold_4576 175_008_scaffold_4576
Species: Enterobacter cloacae (100%)
2 1667 bp 56.63 8.37 76.12
NECEvent2014_5_8_scaffold_2753 175_008_scaffold_2753
Domain: Bacteria (60%)
5 3026 bp 59.68 6.99 76.01
NECEvent2014_5_8_scaffold_5129 175_008_scaffold_5129
Species: Eggerthella lenta (100%)
2 1443 bp 65.70 6.34 75.47
NECEvent2014_5_8_scaffold_3783 175_008_scaffold_3783
Order: Enterobacteriales (100%)
4 2103 bp 43.18 5.92 74.75
NECEvent2014_5_8_scaffold_6163 175_008_scaffold_6163
Species: Bifidobacterium breve (100%)
1 1117 bp 56.22 1.88 74.66
NECEvent2014_5_8_scaffold_5513 175_008_scaffold_5513 3 1304 bp 49.85 17.60 74.31
NECEvent2014_5_8_scaffold_5039 175_008_scaffold_5039
Species: Salmonella enterica (66.67%)
3 1479 bp 42.73 10.14 74.24
NECEvent2014_5_8_scaffold_4051 175_008_scaffold_4051
Species: Paenibacillus polymyxa (50%)
2 1933 bp 51.16 5.51 73.10
NECEvent2014_5_8_scaffold_2109 175_008_scaffold_2109
Species: Escherichia coli (100%)
4 4063 bp 50.23 8.86 73.02
NECEvent2014_5_8_scaffold_1439 175_008_scaffold_1439
Genus: Bacillus (66.67%)
6 5971 bp 25.77 16.50 72.30
NECEvent2014_5_8_scaffold_4788 175_008_scaffold_4788
Species: Firmicutes bacterium CAG:424 (66.67%)
3 1578 bp 29.15 16.92 72.24
NECEvent2014_5_8_scaffold_5087 175_008_scaffold_5087
Species: Enterobacter hormaechei (50%)
2 1459 bp 54.01 5.24 71.76
NECEvent2014_5_8_scaffold_1871 175_008_scaffold_1871
Species: Klebsiella variicola (83.33%)
6 4551 bp 46.06 6.46 70.80
NECEvent2014_5_8_scaffold_6523 175_008_scaffold_6523
Species: Enterobacter sp. MGH 14 (100%)
1 1038 bp 42.49 7.37 70.52
NECEvent2014_5_8_scaffold_5092 175_008_scaffold_5092
Species: Enterobacter sp. 35683 (66.67%)
3 1458 bp 36.90 5.66 70.37
NECEvent2014_5_8_scaffold_5828 175_008_scaffold_5828
Species: Klebsiella pneumoniae (100%)
2 1207 bp 49.71 6.71 70.34
NECEvent2014_5_8_scaffold_1467 175_008_scaffold_1467
Genus: Streptococcus (57.14%)
7 5866 bp 36.46 5.50 69.96
NECEvent2014_5_8_scaffold_4317 175_008_scaffold_4317
Species: Clostridium perfringens (100%)
2 1785 bp 22.07 3.11 69.24
NECEvent2014_5_8_scaffold_3323 175_008_scaffold_3323
Order: Bacillales (66.67%)
3 2427 bp 29.75 5.44 68.48
NECEvent2014_5_8_scaffold_3456 175_008_scaffold_3456
Species: Klebsiella pneumoniae (66.67%)
3 2321 bp 50.28 8.01 67.21
NECEvent2014_5_8_scaffold_2894 175_008_scaffold_2894 4 3678 bp 46.90 7.30 67.16
NECEvent2014_5_8_scaffold_4885 175_008_scaffold_4885
Species: Enterobacter sp. MGH 14 (50%)
2 1538 bp 54.16 4.10 64.37
NECEvent2014_5_8_scaffold_6333 175_008_scaffold_6333
Species: Parvimonas micra (100%)
1 1075 bp 28.37 2.79 64.19
NECEvent2014_5_8_scaffold_2191 175_008_scaffold_2191
Class: Gammaproteobacteria (83.33%)
6 3890 bp 43.96 11.76 62.54
NECEvent2014_5_8_scaffold_4779 175_008_scaffold_4779
Species: Escherichia coli (100%)
1 1583 bp 41.31 6.06 57.99
NECEvent2014_5_8_scaffold_5907 175_008_scaffold_5907
Species: Streptococcus equi (100%)
1 1187 bp 38.67 2.78 57.88
NECEvent2014_5_8_scaffold_3635 175_008_scaffold_3635
Order: Enterobacteriales (100%)
3 2195 bp 48.75 8.41 57.54
NECEvent2014_5_8_scaffold_6441 175_008_scaffold_6441
Domain: Bacteria (66.67%)
3 1055 bp 57.63 5.83 54.22
NECEvent2014_5_8_scaffold_5188 175_008_scaffold_5188
Species: [Clostridium] sordellii (50%)
2 1421 bp 26.60 13.19 53.20
NECEvent2014_5_8_scaffold_3300 175_008_scaffold_3300
Species: Klebsiella pneumoniae (100%)
1 2448 bp 40.48 39.71 52.57
NECEvent2014_5_8_scaffold_3960 175_008_scaffold_3960
Species: Enterobacter cloacae (66.67%)
3 1986 bp 46.48 8.53 51.96
NECEvent2014_5_8_scaffold_5737 175_008_scaffold_5737
Species: Peptoclostridium difficile (100%)
1 1235 bp 48.18 5.22 50.28
NECEvent2014_5_8_scaffold_5672 175_008_scaffold_5672
Species: Enterobacter sp. 35027 (50%)
2 1258 bp 47.22 6.44 46.26
NECEvent2014_5_8_scaffold_6179 175_008_scaffold_6179 5 1114 bp 33.30 22.49 40.31
NECEvent2014_5_8_scaffold_4381 175_008_scaffold_4381
Species: Klebsiella oxytoca (50%)
2 1755 bp 42.17 8.03 39.83
NECEvent2014_5_8_scaffold_6388 175_008_scaffold_6388
Species: Enterobacter cloacae (50%)
2 1064 bp 45.30 4.37 37.22
NECEvent2014_5_8_scaffold_6485 175_008_scaffold_6485
Species: Enterobacter sp. DC4 (50%)
2 1047 bp 52.72 5.44 31.23
Displaying items 151-200 of 213 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.