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NECEvent2014_5_8_scaffold_22

Alias: 175_008_scaffold_22

Search features with annotation key words

Displaying items 1-30 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_22_1
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(379..1653)
DNA (1275bp) protein (425aa)
UPI0003D63EAC related cluster n=1 Tax=unknown RepID=UPI0003D63EAC rbh
Membrane protein {ECO:0000313|EMBL:KGF11168.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A1
arsenic transporter family protein
NECEvent2014_5_8_scaffold_22_trna_4
unknown

Not on your lists

comp(1841..1913)
DNA (73bp)
transferRNA
NECEvent2014_5_8_scaffold_22_trna_3
unknown

Not on your lists

comp(1921..1992)
DNA (72bp)
transferRNA
NECEvent2014_5_8_scaffold_22_trna_2
unknown

Not on your lists

comp(1997..2069)
DNA (73bp)
transferRNA
NECEvent2014_5_8_scaffold_22_2
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2130..3005)
DNA (876bp) protein (292aa)
UPI0003D614A1 related cluster n=1 Tax=unknown RepID=UPI0003D614A1 rbh
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=12
spermidine synthase 1
NECEvent2014_5_8_scaffold_22_3
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3007..3618)
DNA (612bp) protein (204aa)
UPI0003D5D2AA related cluster n=1 Tax=unknown RepID=UPI0003D5D2AA rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF11170.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
septum site-determining protein divIVA
NECEvent2014_5_8_scaffold_22_4
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3633..4418)
DNA (786bp) protein (262aa)
UPI0003D5D755 related cluster n=1 Tax=unknown RepID=UPI0003D5D755 rbh
RNA-binding protein S4 {ECO:0000313|EMBL:KGF11171.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium
S4 domain protein
NECEvent2014_5_8_scaffold_22_5
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4411..5214)
DNA (804bp) protein (268aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMA
UPI0003D61B5D related cluster n=1 Tax=unknown RepID=UPI0003D61B5D
pyrroline-5-carboxylate reductase
NECEvent2014_5_8_scaffold_22_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5211..5672)
DNA (462bp) protein (154aa)
UPI0003D6717A related cluster n=1 Tax=unknown RepID=UPI0003D6717A rbh
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus suc
cell division protein sepF
NECEvent2014_5_8_scaffold_22_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5684..6373)
DNA (690bp) protein (230aa)
UPI0003D6137D related cluster n=1 Tax=unknown RepID=UPI0003D6137D rbh
Alanine racemase protein {ECO:0000313|EMBL:ETI84719.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinici
alanine racemase
NECEvent2014_5_8_scaffold_22_8
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6565..7554)
DNA (990bp) protein (330aa)
UPI0003D5DD63 related cluster n=1 Tax=unknown RepID=UPI0003D5DD63 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF11175.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
hypothetical protein
NECEvent2014_5_8_scaffold_22_9
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7894..8334)
DNA (441bp) protein (147aa)
UPI0003D60D55 related cluster n=1 Tax=unknown RepID=UPI0003D60D55 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF11176.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
msrB; peptide methionine sulfoxide reductase subunit B
NECEvent2014_5_8_scaffold_22_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8331..8768)
DNA (438bp) protein (146aa)
UPI0003D5EC97 related cluster n=1 Tax=unknown RepID=UPI0003D5EC97 rbh
Cupin protein {ECO:0000313|EMBL:ETI84716.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA
cupin
NECEvent2014_5_8_scaffold_22_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8863..9621
DNA (759bp) protein (253aa)
UPI0003D5DC58 related cluster n=1 Tax=unknown RepID=UPI0003D5DC58 rbh
Sulfite exporter TauE/SafE {ECO:0000313|EMBL:ETI84715.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succini
hypothetical protein
NECEvent2014_5_8_scaffold_22_12
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9655..11025
DNA (1371bp) protein (457aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI
UPI0003D6686F related cluster n=1 Tax=unknown RepID=UPI0003D6686F rbh
M18 family aminopeptidase
NECEvent2014_5_8_scaffold_22_13
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11071..12009)
DNA (939bp) protein (313aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incert
cysK1; O-acetylserine sulfhydrylase CysK (EC:2.5.1.47)
UPI0003D5CBEF related cluster n=1 Tax=unknown RepID=UPI0003D5CBEF rbh
NECEvent2014_5_8_scaffold_22_14
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12052..12675)
DNA (624bp) protein (208aa)
UPI0003D5DC92 related cluster n=1 Tax=unknown RepID=UPI0003D5DC92 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF11181.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
hypothetical protein
NECEvent2014_5_8_scaffold_22_15
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12688..13119)
DNA (432bp) protein (144aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales
UPI0003D5920C related cluster n=1 Tax=unknown RepID=UPI0003D5920C
peptidyl-prolyl cis-trans isomerase cyclophilin type
NECEvent2014_5_8_scaffold_22_16
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13116..13829)
DNA (714bp) protein (238aa)
UPI0003D5BED6 related cluster n=1 Tax=unknown RepID=UPI0003D5BED6 rbh
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:ETI84710.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus
UBA/THIF-type NAD/FAD binding protein
NECEvent2014_5_8_scaffold_22_17
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13829..14200)
DNA (372bp) protein (124aa)
UPI0003D5B22D related cluster n=1 Tax=unknown RepID=UPI0003D5B22D
Lactoylglutathione lyase {ECO:0000313|EMBL:KGF11184.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteri
Glyoxalase/bleomycin resistance protein/dioxygenase
NECEvent2014_5_8_scaffold_22_18
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14280..17330)
DNA (3051bp) protein (1017aa)
UPI0003D5D338 related cluster n=1 Tax=unknown RepID=UPI0003D5D338 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF11185.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
exonuclease SbcC
NECEvent2014_5_8_scaffold_22_19
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17327..18448)
DNA (1122bp) protein (374aa)
UPI0003D5AE33 related cluster n=1 Tax=unknown RepID=UPI0003D5AE33 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF11186.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
sbcD; exonuclease SbcD
NECEvent2014_5_8_scaffold_22_20
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18574..19164)
DNA (591bp) protein (197aa)
UPI0003D60873 related cluster n=1 Tax=unknown RepID=UPI0003D60873 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF11187.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
NECEvent2014_5_8_scaffold_22_21
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19285..20820
DNA (1536bp) protein (512aa)
UPI0003D60B0C related cluster n=1 Tax=unknown RepID=UPI0003D60B0C rbh
DEAD/DEAH box helicase {ECO:0000313|EMBL:KGF11188.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium
DEAD/DEAH box helicase
NECEvent2014_5_8_scaffold_22_22
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20855..21631)
DNA (777bp) protein (259aa)
UPI0003D65019 related cluster n=1 Tax=unknown RepID=UPI0003D65019 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI86699.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
NECEvent2014_5_8_scaffold_22_23
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22234..22701)
DNA (468bp) protein (156aa)
UPI0003D66608 related cluster n=1 Tax=unknown RepID=UPI0003D66608 rbh
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" s
ssrA-binding protein
NECEvent2014_5_8_scaffold_22_24
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22716..24803)
DNA (2088bp) protein (696aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1403945 species="Bacteria; Firmicutes; Negativ
UPI0003D67DBA related cluster n=1 Tax=unknown RepID=UPI0003D67DBA rbh
ribonuclease R
NECEvent2014_5_8_scaffold_22_25
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24846..25094)
DNA (249bp) protein (83aa)
UPI0003D633BD related cluster n=1 Tax=unknown RepID=UPI0003D633BD
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:ETI86702.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicocc
preprotein translocase subunit SecG
NECEvent2014_5_8_scaffold_22_26
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25103..25729)
DNA (627bp) protein (209aa)
sigH; RNA polymerase factor sigma-70 (EC:2.7.7.6)
UPI0003D5F292 related cluster n=1 Tax=unknown RepID=UPI0003D5F292 rbh
RNA polymerase sigma-H factor {ECO:0000313|EMBL:ETI86703.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succ
NECEvent2014_5_8_scaffold_22_27
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25802..26362)
DNA (561bp) protein (187aa)
UPI0003D5EFC1 related cluster n=1 Tax=unknown RepID=UPI0003D5EFC1 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI86704.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
Displaying items 1-30 of 116 in total

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