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NECEvent2014_5_8_scaffold_165

Alias: 175_008_scaffold_165

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_165_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1..99)
DNA (99bp) protein (33aa)
UPI0003D6803D related cluster n=1 Tax=unknown RepID=UPI0003D6803D
Elongation factor Tu {ECO:0000256|RuleBase:RU004061}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivo
translation elongation factor Tu
NECEvent2014_5_8_scaffold_165_trna_7
unknown

Not on your lists

comp(220..293)
DNA (74bp)
transferRNA
NECEvent2014_5_8_scaffold_165_trna_6
unknown

Not on your lists

comp(301..373)
DNA (73bp)
transferRNA
NECEvent2014_5_8_scaffold_165_trna_5
unknown

Not on your lists

comp(416..488)
DNA (73bp)
transferRNA
NECEvent2014_5_8_scaffold_165_trna_4
unknown

Not on your lists

comp(500..582)
DNA (83bp)
transferRNA
NECEvent2014_5_8_scaffold_165_trna_3
unknown

Not on your lists

comp(595..667)
DNA (73bp)
transferRNA
NECEvent2014_5_8_scaffold_165_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(781..1014)
DNA (234bp) protein (78aa)
UPI0003D65CB5 related cluster n=1 Tax=unknown RepID=UPI0003D65CB5
Peptidase, u32 family protein {ECO:0000313|EMBL:ETI84539.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succ
hypothetical protein
NECEvent2014_5_8_scaffold_165_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1007..2233)
DNA (1227bp) protein (409aa)
UPI0003D61430 related cluster n=1 Tax=unknown RepID=UPI0003D61430 rbh
Peptidase, U32 family {ECO:0000313|EMBL:ETI84540.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivor
peptidase
NECEvent2014_5_8_scaffold_165_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2243..2842)
DNA (600bp) protein (200aa)
UPI0003D59F75 related cluster n=1 Tax=unknown RepID=UPI0003D59F75 rbh
O-methyltransferase family protein {ECO:0000313|EMBL:ETI84541.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus
O-methyltransferase family protein
NECEvent2014_5_8_scaffold_165_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2826..3815)
DNA (990bp) protein (330aa)
UPI0003D62B3F related cluster n=1 Tax=unknown RepID=UPI0003D62B3F rbh
YceG family protein {ECO:0000313|EMBL:ETI84542.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivoran
aminodeoxychorismate lyase
NECEvent2014_5_8_scaffold_165_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3890..4972)
DNA (1083bp) protein (361aa)
UPI0003D622B5 related cluster n=1 Tax=unknown RepID=UPI0003D622B5 rbh
Radical SAM protein, TIGR01212 family {ECO:0000313|EMBL:ETI84543.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoc
radical SAM protein
NECEvent2014_5_8_scaffold_165_7
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4953..5681)
DNA (729bp) protein (243aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
UPI0003D63B77 related cluster n=1 Tax=unknown RepID=UPI0003D63B77 rbh
ribonuclease 3
NECEvent2014_5_8_scaffold_165_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5681..6928)
DNA (1248bp) protein (416aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales;
UPI0003D5E5B0 related cluster n=1 Tax=unknown RepID=UPI0003D5E5B0 rbh
3-oxoacyl-ACP synthase
NECEvent2014_5_8_scaffold_165_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7138..7374)
DNA (237bp) protein (79aa)
UPI0003D66FFC related cluster n=1 Tax=unknown RepID=UPI0003D66FFC
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenom
acyl carrier protein
NECEvent2014_5_8_scaffold_165_10
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7454..8191)
DNA (738bp) protein (246aa)
UPI0003D65558 related cluster n=1 Tax=unknown RepID=UPI0003D65558 rbh
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KGF08520.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
3-oxoacyl-ACP reductase
NECEvent2014_5_8_scaffold_165_11
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8181..9131)
DNA (951bp) protein (317aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
UPI0003D635B1 related cluster n=1 Tax=unknown RepID=UPI0003D635B1 rbh
malonyl CoA-acyl carrier protein transacylase
NECEvent2014_5_8_scaffold_165_12
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9128..10069)
DNA (942bp) protein (314aa)
UPI0003D64966 related cluster n=1 Tax=unknown RepID=UPI0003D64966 rbh
Enoyl-(Acyl-carrier-protein) reductase II {ECO:0000313|EMBL:ETI84549.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativ
2-nitropropane dioxygenase
NECEvent2014_5_8_scaffold_165_13
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10074..11066)
DNA (993bp) protein (331aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-(acyl-carrier-protein) synthase 3 (EC:2.3.1.41)
UPI0003D5C8C0 related cluster n=1 Tax=unknown RepID=UPI0003D5C8C0 rbh
NECEvent2014_5_8_scaffold_165_14
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11056..12078)
DNA (1023bp) protein (341aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
UPI0003D60AE3 related cluster n=1 Tax=unknown RepID=UPI0003D60AE3 rbh
phosphate acyltransferase
NECEvent2014_5_8_scaffold_165_15
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12075..12626)
DNA (552bp) protein (184aa)
UPI0003D63E4D related cluster n=1 Tax=unknown RepID=UPI0003D63E4D rbh
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ETI84552.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativico
transcriptional regulator
NECEvent2014_5_8_scaffold_165_16
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(12804..13070)
DNA (267bp) protein (89aa)
UPI0003D5C3B5 related cluster n=1 Tax=unknown RepID=UPI0003D5C3B5
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus
ribosomal protein S15
NECEvent2014_5_8_scaffold_165_17
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13209..14099)
DNA (891bp) protein (297aa)
D-alanine aminotransferase {ECO:0000256|RuleBase:RU004520}; EC=2.6.1.21 {ECO:0000256|RuleBase:RU004520};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae;
D-amino acid aminotransferase (EC:2.6.1.21)
UPI0003D62DFD related cluster n=1 Tax=unknown RepID=UPI0003D62DFD rbh
NECEvent2014_5_8_scaffold_165_18
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14110..14562)
DNA (453bp) protein (151aa)
UPI0003D62303 related cluster n=1 Tax=unknown RepID=UPI0003D62303
Bacterioferritin comigratory protein {ECO:0000313|EMBL:ETI84555.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicocc
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
NECEvent2014_5_8_scaffold_165_19
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14638..16398)
DNA (1761bp) protein (587aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae
pyruvate kinase (EC:2.7.1.40 2.7.9.2)
UPI0003D69075 related cluster n=1 Tax=unknown RepID=UPI0003D69075 rbh
NECEvent2014_5_8_scaffold_165_20
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16400..17395)
DNA (996bp) protein (332aa)
UPI0003D64453 related cluster n=1 Tax=unknown RepID=UPI0003D64453 rbh
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:KGF08530.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="C
Electron transfer flavoprotein alpha/beta-subunit
NECEvent2014_5_8_scaffold_165_21
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17392..18195)
DNA (804bp) protein (268aa)
UPI0003D5BCC7 related cluster n=1 Tax=unknown RepID=UPI0003D5BCC7 rbh
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:KGF08531.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Cl
Electron transfer flavoprotein alpha/beta-subunit
NECEvent2014_5_8_scaffold_165_22
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18196..21813)
DNA (3618bp) protein (1206aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae;
UPI0003D69B3C related cluster n=1 Tax=unknown RepID=UPI0003D69B3C rbh
DNA polymerase III
NECEvent2014_5_8_scaffold_165_23
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21786..23456)
DNA (1671bp) protein (557aa)
UPI0003D64159 related cluster n=1 Tax=unknown RepID=UPI0003D64159 rbh
Phosphoribulokinase/uridine kinase {ECO:0000313|EMBL:ETI84560.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus
phosphoribulokinase/uridine kinase family protein
NECEvent2014_5_8_scaffold_165_24
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23622..24158
DNA (537bp) protein (179aa)
UPI0003D5F7AB related cluster n=1 Tax=unknown RepID=UPI0003D5F7AB rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF08534.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
NECEvent2014_5_8_scaffold_165_25
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24136..24657
DNA (522bp) protein (174aa)
UPI0003D64462 related cluster n=1 Tax=unknown RepID=UPI0003D64462 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF08535.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
BioY protein
Displaying items 1-30 of 44 in total

View Taxonomy