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NECEvent2014_5_8_scaffold_1332

Alias: 175_008_scaffold_1332

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_1332_1
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(2..244)
DNA (243bp) protein (81aa)
50S ribosomal protein L17 n=4 Tax=Bacteria RepID=C8WN27_EGGLE
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|RuleBase:RU000661}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1
NECEvent2014_5_8_scaffold_1332_2
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(257..1207)
DNA (951bp) protein (317aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=4 Tax=Bacteria RepID=C8WN28_EGGLE rbh
DNA-directed RNA polymerase subunit alpha
NECEvent2014_5_8_scaffold_1332_3
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(1237..1863)
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=2 Tax=Eggerthella RepID=E5XBZ4_9ACTN rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1
30S ribosomal protein S4
NECEvent2014_5_8_scaffold_1332_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1883..2281)
DNA (399bp) protein (133aa)
30S ribosomal protein S11 n=4 Tax=Bacteria RepID=C8WN30_EGGLE
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
NECEvent2014_5_8_scaffold_1332_5
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(2293..2661)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=4 Tax=Bacteria RepID=C8WN31_EGGLE
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1
NECEvent2014_5_8_scaffold_1332_6
Slackia heliotrinireducens, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(2684..2797)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=18 Tax=Bacteria RepID=C7N7V4_SLAHD
LSU ribosomal protein L36P
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=471855 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;"
NECEvent2014_5_8_scaffold_1332_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2954..3208)
DNA (255bp) protein (85aa)
Translation initiation factor IF-1 n=5 Tax=Bacteria RepID=C8WN33_EGGLE
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
NECEvent2014_5_8_scaffold_1332_8
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3460..4047)
DNA (588bp) protein (196aa)
Membrane protein-like protein n=3 Tax=Eggerthella RepID=C8WN34_EGGLE rbh
hypothetical protein
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strai
NECEvent2014_5_8_scaffold_1332_9
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4176..5216)
DNA (1041bp) protein (347aa)
Tat pathway signal sequence domain protein n=1 Tax=Eggerthella sp. HGA1 RepID=F0HRQ5_9ACTN rbh
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EGC87840.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggert
hypothetical protein
NECEvent2014_5_8_scaffold_1332_10
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5350..6399)
DNA (1050bp) protein (350aa)
Transcriptional regulator, LuxR family n=2 Tax=Eggerthella RepID=C8WN36_EGGLE rbh
Uncharacterized protein {ECO:0000313|EMBL:KGI72321.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60A
LuxR family transcriptional regulator
Displaying 10 items

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