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NECEvent2014_5_8_Eggerthella_1_3_5FAA-rel_64_6

NECEvent2014_5_8_Eggerthella_64_6
In projects: NECEvent2014_5_8

Consensus taxonomy: Eggerthella  →  Eggerthellales  →  Coriobacteriia  →  Actinobacteria  →  Bacteria

Description

fragments of PC.diff merged with Eggerthella as in other (ESOM supported)

Displaying items 651-700 of 1015 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_8_scaffold_2377 175_008_scaffold_2377
Species: Eggerthella lenta (100%)
5 3581 bp 59.12 5.11 86.04
NECEvent2014_5_8_scaffold_2876 175_008_scaffold_2876
Species: Olsenella sp. oral taxon 809 (60%)
5 2905 bp 64.48 5.94 86.02
NECEvent2014_5_8_scaffold_3062 175_008_scaffold_3062
Species: Eggerthella sp. HGA1 (66.67%)
3 2682 bp 63.16 4.59 86.02
NECEvent2014_5_8_scaffold_4563 175_008_scaffold_4563
Species: Eggerthella lenta (66.67%)
3 1671 bp 65.47 6.82 86.00
NECEvent2014_5_8_scaffold_4749 175_008_scaffold_4749
Species: Eggerthella lenta (100%)
2 1598 bp 64.64 7.13 85.98
NECEvent2014_5_8_scaffold_2497 175_008_scaffold_2497
Domain: Bacteria (60%)
5 3354 bp 63.60 5.81 85.96
NECEvent2014_5_8_scaffold_1106 175_008_scaffold_1106
Species: Eggerthella lenta (60%)
5 7667 bp 63.47 6.14 85.91
NECEvent2014_5_8_scaffold_1780 175_008_scaffold_1780
Species: Eggerthella sp. HGA1 (60%)
5 4777 bp 69.19 5.65 85.91
NECEvent2014_5_8_scaffold_4773 175_008_scaffold_4773
Species: Eggerthella sp. HGA1 (50%)
2 1586 bp 67.02 6.43 85.88
NECEvent2014_5_8_scaffold_1912 175_008_scaffold_1912
Species: Eggerthella sp. HGA1 (100%)
3 4451 bp 59.63 6.40 85.87
NECEvent2014_5_8_scaffold_1045 175_008_scaffold_1045
Species: Eggerthella sp. HGA1 (50%)
6 8063 bp 63.51 6.53 85.84
NECEvent2014_5_8_scaffold_6375 175_008_scaffold_6375
Species: Eggerthella lenta (100%)
2 1066 bp 59.94 7.88 85.83
NECEvent2014_5_8_scaffold_2357 175_008_scaffold_2357
Species: Eggerthella lenta (66.67%)
3 3611 bp 69.23 5.11 85.82
NECEvent2014_5_8_scaffold_3717 175_008_scaffold_3717
Species: Enterorhabdus caecimuris (100%)
2 2140 bp 64.11 6.31 85.79
NECEvent2014_5_8_scaffold_6076 175_008_scaffold_6076
Species: Peptoclostridium difficile (100%)
1 1140 bp 64.39 6.18 85.79
NECEvent2014_5_8_scaffold_5295 175_008_scaffold_5295
Species: Eggerthella lenta (50%)
2 1375 bp 60.29 4.36 85.75
NECEvent2014_5_8_scaffold_5568 175_008_scaffold_5568
Species: Eggerthella lenta (50%)
2 1288 bp 63.66 6.06 85.71
NECEvent2014_5_8_scaffold_4406 175_008_scaffold_4406
Species: Eggerthella lenta (50%)
2 1743 bp 59.95 6.54 85.71
NECEvent2014_5_8_scaffold_2051 175_008_scaffold_2051
Species: Eggerthella lenta (50%)
6 4167 bp 64.17 6.26 85.67
NECEvent2014_5_8_scaffold_4185 175_008_scaffold_4185
Species: Peptoclostridium difficile (100%)
2 1853 bp 62.87 5.59 85.64
NECEvent2014_5_8_scaffold_1049 175_008_scaffold_1049
Species: Eggerthella sp. HGA1 (71.43%)
7 8036 bp 59.17 6.61 85.64
NECEvent2014_5_8_scaffold_2232 175_008_scaffold_2232
Species: Eggerthella sp. HGA1 (100%)
6 3820 bp 61.57 6.44 85.60
NECEvent2014_5_8_scaffold_4551 175_008_scaffold_4551
Species: Eggerthella lenta (66.67%)
3 1676 bp 63.90 4.30 85.56
NECEvent2014_5_8_scaffold_6621 175_008_scaffold_6621
Species: Peptoclostridium difficile (50%)
2 1017 bp 62.24 3.98 85.55
NECEvent2014_5_8_scaffold_2706 175_008_scaffold_2706
Species: Eggerthella lenta (100%)
6 3090 bp 64.34 6.50 85.53
NECEvent2014_5_8_scaffold_1084 175_008_scaffold_1084
Species: Eggerthella sp. HGA1 (66.67%)
9 7793 bp 66.52 6.89 85.50
NECEvent2014_5_8_scaffold_1635 175_008_scaffold_1635
Species: Eggerthella sp. HGA1 (85.71%)
7 5170 bp 67.08 4.73 85.47
NECEvent2014_5_8_scaffold_3259 175_008_scaffold_3259
Species: Eggerthella sp. HGA1 (100%)
3 2492 bp 63.28 5.42 85.47
NECEvent2014_5_8_scaffold_6616 175_008_scaffold_6616
Species: Eggerthella sp. HGA1 (50%)
2 1018 bp 61.98 4.27 85.46
NECEvent2014_5_8_scaffold_1925 175_008_scaffold_1925
Species: Eggerthella sp. HGA1 (60%)
5 4415 bp 65.75 5.98 85.41
NECEvent2014_5_8_scaffold_1962 175_008_scaffold_1962
Species: Eggerthella sp. HGA1 (50%)
4 4324 bp 64.48 7.35 85.41
NECEvent2014_5_8_scaffold_4604 175_008_scaffold_4604
Species: Eggerthella lenta (100%)
2 1655 bp 67.19 5.44 85.38
NECEvent2014_5_8_scaffold_1022 175_008_scaffold_1022
Species: Eggerthella sp. HGA1 (60%)
10 8223 bp 61.18 7.42 85.37
NECEvent2014_5_8_scaffold_4900 175_008_scaffold_4900
Species: Eggerthella lenta (100%)
2 1530 bp 59.48 4.31 85.29
NECEvent2014_5_8_scaffold_1185 175_008_scaffold_1185
Species: Eggerthella sp. HGA1 (50%)
10 7183 bp 65.28 5.55 85.24
NECEvent2014_5_8_scaffold_5937 175_008_scaffold_5937
Genus: Propionibacterium (66.67%)
3 1180 bp 59.07 4.96 85.17
NECEvent2014_5_8_scaffold_2983 175_008_scaffold_2983
Species: Eggerthella lenta (50%)
4 2767 bp 65.02 5.42 85.11
NECEvent2014_5_8_scaffold_6325 175_008_scaffold_6325
Species: Eggerthella sp. HGA1 (50%)
2 1076 bp 65.24 3.90 85.04
NECEvent2014_5_8_scaffold_6193 175_008_scaffold_6193
Species: Adlercreutzia equolifaciens (100%)
3 1112 bp 60.61 8.09 84.98
NECEvent2014_5_8_scaffold_4184 175_008_scaffold_4184
Species: Eggerthella sp. HGA1 (66.67%)
3 1854 bp 58.85 6.88 84.95
NECEvent2014_5_8_scaffold_6579 175_008_scaffold_6579
Species: Eggerthella sp. HGA1 (100%)
1 1028 bp 61.28 6.42 84.92
NECEvent2014_5_8_scaffold_2370 175_008_scaffold_2370
Species: Eggerthella lenta (60%)
5 3600 bp 63.50 5.96 84.92
NECEvent2014_5_8_scaffold_2862 175_008_scaffold_2862
Species: Eggerthella lenta (100%)
4 2916 bp 66.87 7.46 84.88
NECEvent2014_5_8_scaffold_3362 175_008_scaffold_3362
Species: Eggerthella lenta (50%)
6 2397 bp 60.08 6.20 84.81
NECEvent2014_5_8_scaffold_4499 175_008_scaffold_4499
Species: Eggerthella lenta (100%)
2 1698 bp 61.96 4.33 84.81
NECEvent2014_5_8_scaffold_6301 175_008_scaffold_6301
Species: Eggerthella sp. HGA1 (100%)
2 1083 bp 64.82 4.71 84.76
NECEvent2014_5_8_scaffold_2717 175_008_scaffold_2717
Species: Eggerthella sp. HGA1 (50%)
2 3076 bp 63.72 5.75 84.75
NECEvent2014_5_8_scaffold_2813 175_008_scaffold_2813
Species: Eggerthella lenta (50%)
2 2967 bp 66.23 5.16 84.73
NECEvent2014_5_8_scaffold_3291 175_008_scaffold_3291
Species: Eggerthella lenta (75%)
4 2454 bp 65.93 4.34 84.72
NECEvent2014_5_8_scaffold_6154 175_008_scaffold_6154
Species: Eggerthella lenta (50%)
2 1119 bp 65.59 5.09 84.72
Displaying items 651-700 of 1015 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.