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NECEvent2014_5_8_Eggerthella_1_3_5FAA-rel_64_6

NECEvent2014_5_8_Eggerthella_64_6
In projects: NECEvent2014_5_8

Consensus taxonomy: Eggerthella  →  Eggerthellales  →  Coriobacteriia  →  Actinobacteria  →  Bacteria

Description

fragments of PC.diff merged with Eggerthella as in other (ESOM supported)

Displaying items 701-750 of 1015 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_8_scaffold_1805 175_008_scaffold_1805
Species: Eggerthella lenta (50%)
4 4722 bp 62.52 6.42 84.69
NECEvent2014_5_8_scaffold_1671 175_008_scaffold_1671
Species: Eggerthella sp. HGA1 (57.14%)
7 5084 bp 66.42 4.93 84.62
NECEvent2014_5_8_scaffold_1503 175_008_scaffold_1503
Order: Eggerthellales (80%)
5 5674 bp 62.57 5.02 84.60
NECEvent2014_5_8_scaffold_1431 175_008_scaffold_1431
Genus: Eggerthella (71.43%)
7 5995 bp 68.24 5.45 84.57
NECEvent2014_5_8_scaffold_3822 175_008_scaffold_3822
Species: Eggerthella lenta (100%)
1 2072 bp 66.26 5.50 84.56
NECEvent2014_5_8_scaffold_1955 175_008_scaffold_1955
Genus: Eggerthella (60%)
5 4340 bp 60.74 7.53 84.54
NECEvent2014_5_8_scaffold_6516 175_008_scaffold_6516
Species: Eggerthella sp. HGA1 (100%)
1 1040 bp 64.04 4.62 84.52
NECEvent2014_5_8_scaffold_1798 175_008_scaffold_1798
Species: Eggerthella lenta (66.67%)
3 4739 bp 64.28 4.84 84.51
NECEvent2014_5_8_scaffold_3096 175_008_scaffold_3096
Species: Eggerthella sp. HGA1 (66.67%)
3 2648 bp 65.37 6.91 84.40
NECEvent2014_5_8_scaffold_2408 175_008_scaffold_2408
Species: Peptoclostridium difficile (66.67%)
3 3523 bp 61.06 5.02 84.39
NECEvent2014_5_8_scaffold_3172 175_008_scaffold_3172
Species: Peptoclostridium difficile (50%)
2 2579 bp 63.71 5.06 84.34
NECEvent2014_5_8_scaffold_2189 175_008_scaffold_2189
Species: Eggerthella sp. HGA1 (57.14%)
7 3893 bp 60.36 6.51 84.31
NECEvent2014_5_8_scaffold_1861 175_008_scaffold_1861
Species: Eggerthella sp. HGA1 (100%)
5 4568 bp 63.97 5.25 84.26
NECEvent2014_5_8_scaffold_5775 175_008_scaffold_5775
Species: Eggerthella lenta (100%)
3 1225 bp 68.73 5.63 84.24
NECEvent2014_5_8_scaffold_4678 175_008_scaffold_4678
Species: Eggerthella sp. HGA1 (66.67%)
3 1631 bp 66.52 6.71 84.24
NECEvent2014_5_8_scaffold_2989 175_008_scaffold_2989
Species: Eggerthella lenta (66.67%)
3 2760 bp 64.35 5.43 84.24
NECEvent2014_5_8_scaffold_2293 175_008_scaffold_2293
Species: Eggerthella sp. HGA1 (60%)
5 3709 bp 62.98 5.42 84.23
NECEvent2014_5_8_scaffold_3392 175_008_scaffold_3392
Species: Eggerthella sp. HGA1 (66.67%)
3 2373 bp 61.06 5.12 84.20
NECEvent2014_5_8_scaffold_1343 175_008_scaffold_1343
Species: Eggerthella sp. HGA1 (60%)
5 6360 bp 64.73 5.47 84.15
NECEvent2014_5_8_scaffold_2267 175_008_scaffold_2267
Species: Eggerthella sp. HGA1 (50%)
4 3754 bp 63.27 6.59 83.91
NECEvent2014_5_8_scaffold_1626 175_008_scaffold_1626
Species: Eggerthella sp. HGA1 (71.43%)
7 5202 bp 63.40 5.33 83.85
NECEvent2014_5_8_scaffold_5817 175_008_scaffold_5817
Species: Eggerthella lenta (66.67%)
3 1213 bp 60.59 6.92 83.84
NECEvent2014_5_8_scaffold_5422 175_008_scaffold_5422
Species: Eggerthella lenta (100%)
1 1335 bp 59.10 16.18 83.82
NECEvent2014_5_8_scaffold_4571 175_008_scaffold_4571
Species: Eggerthella lenta (100%)
3 1668 bp 63.19 6.29 83.81
NECEvent2014_5_8_scaffold_2493 175_008_scaffold_2493
Species: Eggerthella sp. HGA1 (50%)
4 3365 bp 61.90 6.73 83.80
NECEvent2014_5_8_scaffold_3301 175_008_scaffold_3301
Species: Eggerthella sp. HGA1 (50%)
2 2448 bp 68.46 5.82 83.70
NECEvent2014_5_8_scaffold_2965 175_008_scaffold_2965
Species: Eggerthella lenta (75%)
4 2789 bp 62.10 6.83 83.69
NECEvent2014_5_8_scaffold_1814 175_008_scaffold_1814
Genus: Eggerthella (66.67%)
3 4697 bp 63.10 7.98 83.61
NECEvent2014_5_8_scaffold_2721 175_008_scaffold_2721
Species: Eggerthella sp. HGA1 (60%)
5 3068 bp 64.96 5.72 83.60
NECEvent2014_5_8_scaffold_6152 175_008_scaffold_6152
Species: Gordonibacter pamelaeae (50%)
2 1120 bp 53.48 7.23 83.57
NECEvent2014_5_8_scaffold_2314 175_008_scaffold_2314
Species: Eggerthella lenta (100%)
6 3676 bp 69.89 5.71 83.57
NECEvent2014_5_8_scaffold_3503 175_008_scaffold_3503
Species: Eggerthella sp. HGA1 (50%)
4 2291 bp 63.07 8.12 83.54
NECEvent2014_5_8_scaffold_1471 175_008_scaffold_1471
Genus: Eggerthella (50%)
6 5834 bp 61.90 10.03 83.51
NECEvent2014_5_8_scaffold_5634 175_008_scaffold_5634
Species: Eggerthella lenta (50%)
2 1272 bp 65.25 5.54 83.49
NECEvent2014_5_8_scaffold_5637 175_008_scaffold_5637
Species: Eggerthella lenta (50%)
2 1272 bp 70.99 6.96 83.49
NECEvent2014_5_8_scaffold_1205 175_008_scaffold_1205
Genus: Eggerthella (80%)
5 7083 bp 62.77 6.52 83.44
NECEvent2014_5_8_scaffold_4162 175_008_scaffold_4162
Species: Eggerthella sp. HGA1 (50%)
2 1865 bp 61.77 5.71 83.32
NECEvent2014_5_8_scaffold_2668 175_008_scaffold_2668
Species: Eggerthella sp. HGA1 (50%)
4 3122 bp 65.50 6.05 83.25
NECEvent2014_5_8_scaffold_2418 175_008_scaffold_2418
Domain: Bacteria (80%)
5 6143 bp 62.95 5.93 83.22
NECEvent2014_5_8_scaffold_3651 175_008_scaffold_3651
Species: Eggerthella lenta (60%)
5 3973 bp 65.32 5.93 83.21
NECEvent2014_5_8_scaffold_5999 175_008_scaffold_5999
Species: Eggerthella sp. HGA1 (100%)
1 1161 bp 69.08 5.56 83.20
NECEvent2014_5_8_scaffold_1881 175_008_scaffold_1881
Species: Eggerthella sp. HGA1 (57.14%)
7 4530 bp 60.75 5.56 83.18
NECEvent2014_5_8_scaffold_1607 175_008_scaffold_1607
Species: Eggerthella sp. HGA1 (50%)
4 5277 bp 65.66 5.97 83.17
NECEvent2014_5_8_scaffold_2038 175_008_scaffold_2038
Species: Eggerthella sp. HGA1 (66.67%)
3 4193 bp 63.58 5.65 83.14
NECEvent2014_5_8_scaffold_1771 175_008_scaffold_1771
Species: Eggerthella lenta (60%)
5 4812 bp 63.20 5.39 83.10
NECEvent2014_5_8_scaffold_2548 175_008_scaffold_2548
Species: Eggerthella lenta (100%)
3 3272 bp 65.71 7.70 83.07
NECEvent2014_5_8_scaffold_6054 175_008_scaffold_6054
Species: Eggerthella lenta (100%)
1 1145 bp 59.30 4.85 83.06
NECEvent2014_5_8_scaffold_4187 175_008_scaffold_4187
Genus: Propionibacterium (50%)
4 1853 bp 67.30 4.05 83.05
NECEvent2014_5_8_scaffold_2625 175_008_scaffold_2625
Species: Eggerthella sp. HGA1 (75%)
4 3161 bp 61.91 5.79 83.04
NECEvent2014_5_8_scaffold_1255 175_008_scaffold_1255
Species: Eggerthella lenta (66.67%)
9 6741 bp 59.68 5.65 82.96
Displaying items 701-750 of 1015 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.