ggKbase home page

NECEvent2014_5_8_Eggerthella_1_3_5FAA-rel_64_6

NECEvent2014_5_8_Eggerthella_64_6
In projects: NECEvent2014_5_8

Consensus taxonomy: Eggerthella  →  Eggerthellales  →  Coriobacteriia  →  Actinobacteria  →  Bacteria

Description

fragments of PC.diff merged with Eggerthella as in other (ESOM supported)

Displaying items 751-800 of 1015 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_8_scaffold_6688 175_008_scaffold_6688
Species: Peptoclostridium difficile (100%)
1 1002 bp 61.78 6.74 82.93
NECEvent2014_5_8_scaffold_4805 175_008_scaffold_4805
Species: Eggerthella sp. HGA1 (100%)
2 1571 bp 67.22 6.97 82.88
NECEvent2014_5_8_scaffold_4490 175_008_scaffold_4490
Species: Peptoclostridium difficile (100%)
2 1702 bp 59.81 5.02 82.84
NECEvent2014_5_8_scaffold_3479 175_008_scaffold_3479
Genus: Eggerthella (60%)
5 2307 bp 61.60 5.79 82.83
NECEvent2014_5_8_scaffold_6011 175_008_scaffold_6011
Species: Eggerthella lenta (100%)
1 1159 bp 67.39 7.51 82.83
NECEvent2014_5_8_scaffold_1937 175_008_scaffold_1937
Species: Eggerthella lenta (100%)
3 4388 bp 64.40 6.73 82.79
NECEvent2014_5_8_scaffold_1232 175_008_scaffold_1232
Species: Eggerthella sp. HGA1 (66.67%)
6 6919 bp 60.67 7.18 82.77
NECEvent2014_5_8_scaffold_1584 175_008_scaffold_1584
Species: Eggerthella sp. HGA1 (71.43%)
7 6695 bp 57.51 6.97 82.76
NECEvent2014_5_8_scaffold_2342 175_008_scaffold_2342
Species: Eggerthella lenta (75%)
4 3636 bp 67.90 5.49 82.76
NECEvent2014_5_8_scaffold_1813 175_008_scaffold_1813
Species: Eggerthella lenta (50%)
6 4698 bp 70.65 5.36 82.69
NECEvent2014_5_8_scaffold_5235 175_008_scaffold_5235
Species: Eggerthella lenta (50%)
2 1404 bp 68.45 5.13 82.69
NECEvent2014_5_8_scaffold_2824 175_008_scaffold_2824
Species: Eggerthella sp. HGA1 (50%)
4 2957 bp 63.95 6.54 82.69
NECEvent2014_5_8_scaffold_4532 175_008_scaffold_4532
Species: Eggerthella sp. HGA1 (50%)
2 1684 bp 65.26 5.52 82.66
NECEvent2014_5_8_scaffold_5819 175_008_scaffold_5819
Species: Eggerthella sp. HGA1 (100%)
2 1213 bp 63.48 6.80 82.61
NECEvent2014_5_8_scaffold_3672 175_008_scaffold_3672
Species: Peptoclostridium difficile (50%)
2 2169 bp 63.72 5.19 82.57
NECEvent2014_5_8_scaffold_2891 175_008_scaffold_2891
Species: Eggerthella sp. HGA1 (80%)
5 2886 bp 62.61 5.15 82.54
NECEvent2014_5_8_scaffold_4709 175_008_scaffold_4709
Species: Eggerthella sp. HGA1 (100%)
1 1614 bp 56.32 7.34 82.53
NECEvent2014_5_8_scaffold_1763 175_008_scaffold_1763
Species: Eggerthella lenta (100%)
5 4825 bp 61.82 5.94 82.51
NECEvent2014_5_8_scaffold_2820 175_008_scaffold_2820
Species: Eggerthella sp. HGA1 (66.67%)
3 2960 bp 66.76 5.27 82.40
NECEvent2014_5_8_scaffold_2692 175_008_scaffold_2692
Species: Eggerthella sp. HGA1 (50%)
4 3100 bp 65.16 5.66 82.35
NECEvent2014_5_8_scaffold_4648 175_008_scaffold_4648
Species: Eggerthella lenta (66.67%)
3 1640 bp 59.70 4.30 82.32
NECEvent2014_5_8_scaffold_3708 175_008_scaffold_3708
Genus: Eggerthella (50%)
4 2145 bp 61.31 6.29 82.19
NECEvent2014_5_8_scaffold_3034 175_008_scaffold_3034
Species: Eggerthella lenta (50%)
4 2712 bp 60.55 5.25 82.19
NECEvent2014_5_8_scaffold_2970 175_008_scaffold_2970
Species: Eggerthella sp. HGA1 (75%)
4 2782 bp 63.30 5.18 82.17
NECEvent2014_5_8_scaffold_3875 175_008_scaffold_3875
Species: Eggerthella sp. HGA1 (100%)
2 2041 bp 58.60 8.67 82.17
NECEvent2014_5_8_scaffold_2551 175_008_scaffold_2551
Species: Eggerthella lenta (50%)
4 3265 bp 67.38 6.25 82.14
NECEvent2014_5_8_scaffold_1289 175_008_scaffold_1289
Genus: Eggerthella (57.14%)
7 6549 bp 65.11 5.91 82.09
NECEvent2014_5_8_scaffold_6417 175_008_scaffold_6417
Species: Mobiluncus curtisii (100%)
1 1060 bp 63.68 3.96 82.08
NECEvent2014_5_8_scaffold_5894 175_008_scaffold_5894
Species: Eggerthella sp. HGA1 (66.67%)
3 1189 bp 61.73 4.04 82.00
NECEvent2014_5_8_scaffold_2301 175_008_scaffold_2301
Species: Eggerthella sp. HGA1 (66.67%)
3 3697 bp 62.46 4.99 81.96
NECEvent2014_5_8_scaffold_2631 175_008_scaffold_2631
Species: Eggerthella lenta (75%)
4 3152 bp 65.74 5.09 81.95
NECEvent2014_5_8_scaffold_3288 175_008_scaffold_3288
Species: Eggerthella lenta (100%)
2 2454 bp 68.30 6.97 81.91
NECEvent2014_5_8_scaffold_3550 175_008_scaffold_3550
Genus: Eggerthella (57.14%)
7 2265 bp 61.85 6.09 81.90
NECEvent2014_5_8_scaffold_3032 175_008_scaffold_3032
Species: Eggerthella sp. HGA1 (100%)
3 2713 bp 63.18 6.86 81.83
NECEvent2014_5_8_scaffold_3676 175_008_scaffold_3676
Species: Eggerthella sp. HGA1 (66.67%)
3 2164 bp 61.78 7.07 81.79
NECEvent2014_5_8_scaffold_4491 175_008_scaffold_4491
Species: Eggerthella sp. HGA1 (75%)
4 1702 bp 64.10 5.64 81.79
NECEvent2014_5_8_scaffold_4767 175_008_scaffold_4767
Species: Eggerthella sp. HGA1 (100%)
4 1589 bp 65.76 6.04 81.75
NECEvent2014_5_8_scaffold_5317 175_008_scaffold_5317
Species: Eggerthella sp. HGA1 (100%)
1 1369 bp 61.58 5.37 81.74
NECEvent2014_5_8_scaffold_3312 175_008_scaffold_3312
Species: Eggerthella sp. HGA1 (50%)
4 2441 bp 63.17 6.88 81.73
NECEvent2014_5_8_scaffold_1395 175_008_scaffold_1395
Species: Eggerthella sp. HGA1 (50%)
6 6146 bp 65.39 5.98 81.61
NECEvent2014_5_8_scaffold_3224 175_008_scaffold_3224
Species: Eggerthella lenta (66.67%)
3 2533 bp 65.22 6.22 81.60
NECEvent2014_5_8_scaffold_4024 175_008_scaffold_4024
Species: Eggerthella lenta (66.67%)
3 1945 bp 65.60 4.94 81.59
NECEvent2014_5_8_scaffold_6682 175_008_scaffold_6682
Species: Eggerthella lenta (100%)
1 1004 bp 68.13 8.96 81.57
NECEvent2014_5_8_scaffold_3360 175_008_scaffold_3360
Species: Eggerthella lenta (50%)
2 2399 bp 62.90 4.44 81.53
NECEvent2014_5_8_scaffold_4816 175_008_scaffold_4816
Species: Eggerthella lenta (100%)
2 1564 bp 64.77 7.19 81.52
NECEvent2014_5_8_scaffold_5065 175_008_scaffold_5065
Species: Eggerthella lenta (50%)
4 1469 bp 59.56 7.25 81.48
NECEvent2014_5_8_scaffold_5836 175_008_scaffold_5836
Species: Eggerthella lenta (50%)
2 1204 bp 66.69 7.35 81.48
NECEvent2014_5_8_scaffold_2136 175_008_scaffold_2136
Species: Eggerthella lenta (75%)
4 3996 bp 67.42 5.48 81.46
NECEvent2014_5_8_scaffold_2143 175_008_scaffold_2143
Species: Peptoclostridium difficile (50%)
4 3985 bp 65.17 4.89 81.46
NECEvent2014_5_8_scaffold_2507 175_008_scaffold_2507
Species: Eggerthella lenta (75%)
4 3334 bp 64.43 5.71 81.43
Displaying items 751-800 of 1015 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.