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NECEvent2014_5_8_Eggerthella_1_3_5FAA-rel_64_6

NECEvent2014_5_8_Eggerthella_64_6
In projects: NECEvent2014_5_8

Consensus taxonomy: Eggerthella  →  Eggerthellales  →  Coriobacteriia  →  Actinobacteria  →  Bacteria

Description

fragments of PC.diff merged with Eggerthella as in other (ESOM supported)

Displaying items 201-250 of 1015 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_8_scaffold_6522 175_008_scaffold_6522
Species: Peptoclostridium difficile (50%)
2 1039 bp 63.04 6.64 65.83
NECEvent2014_5_8_scaffold_1246 175_008_scaffold_1246
Species: Eggerthella lenta (100%)
4 6819 bp 61.99 6.64 87.37
NECEvent2014_5_8_scaffold_2340 175_008_scaffold_2340
Species: Eggerthella lenta (100%)
3 3638 bp 65.89 6.64 87.66
NECEvent2014_5_8_scaffold_1832 175_008_scaffold_1832
Species: Eggerthella lenta (50%)
6 4630 bp 61.14 6.64 77.17
NECEvent2014_5_8_scaffold_4936 175_008_scaffold_4936
Species: Eggerthella lenta (66.67%)
3 1515 bp 62.84 6.63 63.56
NECEvent2014_5_8_scaffold_3613 175_008_scaffold_3613
Species: Eggerthella sp. HGA1 (100%)
2 2217 bp 65.09 6.63 89.04
NECEvent2014_5_8_scaffold_2082 175_008_scaffold_2082
Species: Eggerthella sp. HGA1 (80%)
5 4101 bp 58.84 6.62 100.07
NECEvent2014_5_8_scaffold_5483 175_008_scaffold_5483
Species: Eggerthella sp. HGA1 (100%)
1 1315 bp 64.03 6.62 70.95
NECEvent2014_5_8_scaffold_4925 175_008_scaffold_4925
Species: Eggerthella lenta (66.67%)
3 1520 bp 51.05 6.61 98.88
NECEvent2014_5_8_scaffold_1049 175_008_scaffold_1049
Species: Eggerthella sp. HGA1 (71.43%)
7 8036 bp 59.17 6.61 85.64
NECEvent2014_5_8_scaffold_1860 175_008_scaffold_1860
Species: Eggerthella sp. HGA1 (50%)
6 4571 bp 62.37 6.60 88.60
NECEvent2014_5_8_scaffold_2396 175_008_scaffold_2396
Species: Eggerthella lenta (50%)
4 3543 bp 63.51 6.60 86.11
NECEvent2014_5_8_scaffold_3422 175_008_scaffold_3422
Species: Eggerthella lenta (66.67%)
3 2346 bp 63.13 6.59 92.07
NECEvent2014_5_8_scaffold_3229 175_008_scaffold_3229
Species: Eggerthella sp. HGA1 (66.67%)
3 2527 bp 62.60 6.59 94.86
NECEvent2014_5_8_scaffold_2996 175_008_scaffold_2996
Species: Eggerthella lenta (50%)
4 2753 bp 61.06 6.59 92.44
NECEvent2014_5_8_scaffold_2267 175_008_scaffold_2267
Species: Eggerthella sp. HGA1 (50%)
4 3754 bp 63.27 6.59 83.91
NECEvent2014_5_8_scaffold_3314 175_008_scaffold_3314
Species: Eggerthella lenta (100%)
2 2437 bp 59.05 6.59 94.54
NECEvent2014_5_8_scaffold_2822 175_008_scaffold_2822
Species: Eggerthella lenta (100%)
3 2957 bp 52.52 6.59 80.25
NECEvent2014_5_8_scaffold_4108 175_008_scaffold_4108
Species: Eggerthella sp. HGA1 (100%)
3 1888 bp 65.20 6.59 79.77
NECEvent2014_5_8_scaffold_1923 175_008_scaffold_1923
Order: Eggerthellales (50%)
6 4424 bp 51.04 6.58 76.63
NECEvent2014_5_8_scaffold_4279 175_008_scaffold_4279
Species: Eggerthella lenta (66.67%)
3 1802 bp 65.32 6.58 95.23
NECEvent2014_5_8_scaffold_1875 175_008_scaffold_1875
Species: Eggerthella sp. HGA1 (83.33%)
6 4540 bp 64.03 6.57 79.96
NECEvent2014_5_8_scaffold_4190 175_008_scaffold_4190
Species: Eggerthella lenta (50%)
2 1851 bp 63.97 6.56 89.14
NECEvent2014_5_8_scaffold_1546 175_008_scaffold_1546
Genus: Eggerthella (63.64%)
11 5508 bp 60.28 6.56 72.71
NECEvent2014_5_8_scaffold_3384 175_008_scaffold_3384
Species: Eggerthella sp. YY7918 (50%)
2 2377 bp 66.55 6.56 93.65
NECEvent2014_5_8_scaffold_3693 175_008_scaffold_3693
Species: Eggerthella lenta (66.67%)
3 2154 bp 65.60 6.55 90.95
NECEvent2014_5_8_scaffold_1851 175_008_scaffold_1851
Species: Eggerthella lenta (100%)
5 4581 bp 62.82 6.55 89.26
NECEvent2014_5_8_scaffold_688 175_008_scaffold_688
Species: Eggerthella lenta (58.33%)
12 12072 bp 64.16 6.54 78.38
NECEvent2014_5_8_scaffold_2045 175_008_scaffold_2045
Species: Eggerthella lenta (75%)
4 5159 bp 63.46 6.54 90.83
NECEvent2014_5_8_scaffold_2824 175_008_scaffold_2824
Species: Eggerthella sp. HGA1 (50%)
4 2957 bp 63.95 6.54 82.69
NECEvent2014_5_8_scaffold_2067 175_008_scaffold_2067
Species: Eggerthella lenta (50%)
4 4129 bp 61.54 6.54 80.14
NECEvent2014_5_8_scaffold_4406 175_008_scaffold_4406
Species: Eggerthella lenta (50%)
2 1743 bp 59.95 6.54 85.71
NECEvent2014_5_8_scaffold_4166 175_008_scaffold_4166
Species: Eggerthella lenta (50%)
2 1862 bp 64.18 6.53 67.35
NECEvent2014_5_8_scaffold_663 175_008_scaffold_663
Species: Eggerthella lenta (100%)
10 12567 bp 61.06 6.53 91.14
NECEvent2014_5_8_scaffold_1045 175_008_scaffold_1045
Species: Eggerthella sp. HGA1 (50%)
6 8063 bp 63.51 6.53 85.84
NECEvent2014_5_8_scaffold_894 175_008_scaffold_894
Species: Eggerthella sp. HGA1 (88.89%)
9 9364 bp 60.92 6.52 88.17
NECEvent2014_5_8_scaffold_1205 175_008_scaffold_1205
Genus: Eggerthella (80%)
5 7083 bp 62.77 6.52 83.44
NECEvent2014_5_8_scaffold_5425 175_008_scaffold_5425
Species: Eggerthella sp. HGA1 (100%)
3 1334 bp 59.90 6.52 99.85
NECEvent2014_5_8_scaffold_5426 175_008_scaffold_5426
Species: Eggerthella lenta (100%)
1 1334 bp 64.09 6.52 69.94
NECEvent2014_5_8_scaffold_2066 175_008_scaffold_2066
Species: Eggerthella sp. YY7918 (50%)
2 4138 bp 66.34 6.52 95.77
NECEvent2014_5_8_scaffold_6421 175_008_scaffold_6421
Species: Peptoclostridium difficile (100%)
1 1059 bp 66.19 6.52 99.72
NECEvent2014_5_8_scaffold_818 175_008_scaffold_818
Genus: Eggerthella (62.5%)
8 10145 bp 59.85 6.52 92.32
NECEvent2014_5_8_scaffold_2189 175_008_scaffold_2189
Species: Eggerthella sp. HGA1 (57.14%)
7 3893 bp 60.36 6.51 84.31
NECEvent2014_5_8_scaffold_4044 175_008_scaffold_4044
Species: Eggerthella lenta (66.67%)
3 1936 bp 67.87 6.51 87.71
NECEvent2014_5_8_scaffold_3364 175_008_scaffold_3364
Species: Eggerthella sp. HGA1 (50%)
2 2395 bp 64.55 6.51 97.08
NECEvent2014_5_8_scaffold_2706 175_008_scaffold_2706
Species: Eggerthella lenta (100%)
6 3090 bp 64.34 6.50 85.53
NECEvent2014_5_8_scaffold_3002 175_008_scaffold_3002
Species: Slackia sp. CM382 (50%)
4 2747 bp 66.29 6.50 93.59
NECEvent2014_5_8_scaffold_4868 175_008_scaffold_4868
Species: Eggerthella sp. HGA1 (50%)
2 1546 bp 63.52 6.50 71.22
NECEvent2014_5_8_scaffold_1600 175_008_scaffold_1600
Species: Eggerthella sp. HGA1 (57.14%)
7 5316 bp 67.63 6.49 87.36
NECEvent2014_5_8_scaffold_6200 175_008_scaffold_6200
Species: Eggerthella sp. HGA1 (100%)
2 1109 bp 65.64 6.49 97.66
Displaying items 201-250 of 1015 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.