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NECEvent2014_5_8_Eggerthella_1_3_5FAA-rel_64_6

NECEvent2014_5_8_Eggerthella_64_6
In projects: NECEvent2014_5_8

Consensus taxonomy: Eggerthella  →  Eggerthellales  →  Coriobacteriia  →  Actinobacteria  →  Bacteria

Description

fragments of PC.diff merged with Eggerthella as in other (ESOM supported)

Displaying items 151-200 of 1015 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_8_scaffold_4047 175_008_scaffold_4047
Species: Eggerthella sp. HGA1 (100%)
3 1934 bp 67.17 6.83 98.97
NECEvent2014_5_8_scaffold_1786 175_008_scaffold_1786
Species: Eggerthella sp. HGA1 (66.67%)
3 4763 bp 65.53 6.83 79.49
NECEvent2014_5_8_scaffold_4886 175_008_scaffold_4886
Species: Eggerthella lenta (66.67%)
3 1538 bp 62.74 6.83 88.17
NECEvent2014_5_8_scaffold_867 175_008_scaffold_867
Species: Eggerthella lenta (85.71%)
7 9674 bp 53.59 6.82 92.57
NECEvent2014_5_8_scaffold_1941 175_008_scaffold_1941
Genus: Lachnoclostridium (50%)
6 4375 bp 49.94 6.82 73.23
NECEvent2014_5_8_scaffold_4563 175_008_scaffold_4563
Species: Eggerthella lenta (66.67%)
3 1671 bp 65.47 6.82 86.00
NECEvent2014_5_8_scaffold_3331 175_008_scaffold_3331
Species: Eggerthella lenta (66.67%)
3 2421 bp 60.55 6.82 71.87
NECEvent2014_5_8_scaffold_5216 175_008_scaffold_5216
Species: Peptoclostridium difficile (50%)
2 1410 bp 64.75 6.81 67.45
NECEvent2014_5_8_scaffold_6429 175_008_scaffold_6429
Species: Eggerthella lenta (100%)
1 1057 bp 69.16 6.81 92.24
NECEvent2014_5_8_scaffold_5819 175_008_scaffold_5819
Species: Eggerthella sp. HGA1 (100%)
2 1213 bp 63.48 6.80 82.61
NECEvent2014_5_8_scaffold_1493 175_008_scaffold_1493
Species: Peptoclostridium difficile (50%)
6 5734 bp 62.02 6.80 90.25
NECEvent2014_5_8_scaffold_5210 175_008_scaffold_5210
Species: Eggerthella lenta (100%)
1 1412 bp 63.60 6.80 78.61
NECEvent2014_5_8_scaffold_3026 175_008_scaffold_3026
Order: Eggerthellales (100%)
3 2719 bp 62.30 6.79 96.98
NECEvent2014_5_8_scaffold_1060 175_008_scaffold_1060
Species: Eggerthella sp. HGA1 (50%)
8 7957 bp 61.34 6.79 86.45
NECEvent2014_5_8_scaffold_3896 175_008_scaffold_3896
Species: Eggerthella sp. YY7918 (75%)
4 2032 bp 63.88 6.79 92.86
NECEvent2014_5_8_scaffold_690 175_008_scaffold_690
Species: Eggerthella sp. HGA1 (75%)
8 11973 bp 52.80 6.78 99.87
NECEvent2014_5_8_scaffold_800 175_008_scaffold_800
Species: Peptoclostridium difficile (100%)
7 10435 bp 51.76 6.77 96.37
NECEvent2014_5_8_scaffold_5725 175_008_scaffold_5725
Species: Eggerthella sp. HGA1 (100%)
1 1240 bp 73.47 6.77 99.92
NECEvent2014_5_8_scaffold_4391 175_008_scaffold_4391
Species: Eggerthella sp. HGA1 (100%)
2 1751 bp 62.25 6.77 78.47
NECEvent2014_5_8_scaffold_1083 175_008_scaffold_1083
Species: Eggerthella sp. HGA1 (75%)
4 7801 bp 64.29 6.77 90.07
NECEvent2014_5_8_scaffold_6206 175_008_scaffold_6206
Species: Eggerthella sp. HGA1 (100%)
2 1109 bp 62.49 6.76 98.47
NECEvent2014_5_8_scaffold_1386 175_008_scaffold_1386
Genus: Eggerthella (60%)
5 6172 bp 52.32 6.76 96.73
NECEvent2014_5_8_scaffold_1789 175_008_scaffold_1789
Species: Eggerthella lenta (75%)
4 4749 bp 65.63 6.76 86.67
NECEvent2014_5_8_scaffold_4639 175_008_scaffold_4639
Species: Eggerthella sp. HGA1 (100%)
2 1642 bp 62.24 6.76 97.75
NECEvent2014_5_8_scaffold_3387 175_008_scaffold_3387
Species: Eggerthella sp. HGA1 (100%)
3 2373 bp 59.80 6.76 93.17
NECEvent2014_5_8_scaffold_1993 175_008_scaffold_1993
Species: Eggerthella lenta (50%)
4 4267 bp 63.98 6.75 86.83
NECEvent2014_5_8_scaffold_4845 175_008_scaffold_4845
Species: Eggerthella sp. HGA1 (66.67%)
3 1556 bp 60.09 6.75 54.37
NECEvent2014_5_8_scaffold_6370 175_008_scaffold_6370
Species: Eggerthella lenta (50%)
2 1067 bp 67.29 6.75 64.39
NECEvent2014_5_8_scaffold_2101 175_008_scaffold_2101
Species: Peptoclostridium difficile (50%)
2 4074 bp 64.56 6.74 94.04
NECEvent2014_5_8_scaffold_6688 175_008_scaffold_6688
Species: Peptoclostridium difficile (100%)
1 1002 bp 61.78 6.74 82.93
NECEvent2014_5_8_scaffold_4682 175_008_scaffold_4682
Species: Peptoclostridium difficile (100%)
1 1628 bp 62.53 6.73 94.90
NECEvent2014_5_8_scaffold_1125 175_008_scaffold_1125
Species: Eggerthella lenta (100%)
7 7513 bp 63.54 6.73 86.61
NECEvent2014_5_8_scaffold_1937 175_008_scaffold_1937
Species: Eggerthella lenta (100%)
3 4388 bp 64.40 6.73 82.79
NECEvent2014_5_8_scaffold_1204 175_008_scaffold_1204
Species: Eggerthella sp. HGA1 (55.56%)
9 7085 bp 63.73 6.73 80.88
NECEvent2014_5_8_scaffold_2493 175_008_scaffold_2493
Species: Eggerthella sp. HGA1 (50%)
4 3365 bp 61.90 6.73 83.80
NECEvent2014_5_8_scaffold_4678 175_008_scaffold_4678
Species: Eggerthella sp. HGA1 (66.67%)
3 1631 bp 66.52 6.71 84.24
NECEvent2014_5_8_scaffold_4181 175_008_scaffold_4181
Species: Eggerthella sp. HGA1 (66.67%)
3 1855 bp 64.58 6.71 81.02
NECEvent2014_5_8_scaffold_6471 175_008_scaffold_6471
Species: Eggerthella sp. HGA1 (100%)
1 1050 bp 59.14 6.71 71.71
NECEvent2014_5_8_scaffold_2612 175_008_scaffold_2612
Genus: Eggerthella (66.67%)
3 3173 bp 58.37 6.71 49.45
NECEvent2014_5_8_scaffold_4670 175_008_scaffold_4670
Species: Eggerthella sp. HGA1 (50%)
2 1634 bp 69.03 6.70 79.68
NECEvent2014_5_8_scaffold_3519 175_008_scaffold_3519
Species: Eggerthella sp. HGA1 (100%)
2 2285 bp 62.41 6.70 92.30
NECEvent2014_5_8_scaffold_3581 175_008_scaffold_3581
Species: Eggerthella sp. HGA1 (50%)
2 2238 bp 65.82 6.70 74.66
NECEvent2014_5_8_scaffold_1332 175_008_scaffold_1332
Genus: Eggerthella (70%)
10 6401 bp 59.96 6.70 88.06
NECEvent2014_5_8_scaffold_1360 175_008_scaffold_1360
Species: Eggerthella lenta (60%)
5 6304 bp 63.40 6.69 87.71
NECEvent2014_5_8_scaffold_4710 175_008_scaffold_4710
Species: Eggerthella sp. HGA1 (100%)
2 1614 bp 66.05 6.69 89.78
NECEvent2014_5_8_scaffold_736 175_008_scaffold_736
Genus: Eggerthella (50%)
10 11296 bp 61.92 6.69 95.17
NECEvent2014_5_8_scaffold_5590 175_008_scaffold_5590
Species: Eggerthella lenta (100%)
2 1281 bp 66.82 6.67 63.23
NECEvent2014_5_8_scaffold_5383 175_008_scaffold_5383
Species: Eggerthella sp. HGA1 (100%)
3 1350 bp 62.37 6.67 95.78
NECEvent2014_5_8_scaffold_2090 175_008_scaffold_2090
Species: Eggerthella lenta (50%)
4 4092 bp 65.49 6.67 93.33
NECEvent2014_5_8_scaffold_3714 175_008_scaffold_3714
Species: Peptoclostridium difficile (50%)
2 2142 bp 65.83 6.65 88.24
Displaying items 151-200 of 1015 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.