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NECEvent2014_5_8_Eggerthella_1_3_5FAA-rel_64_6

NECEvent2014_5_8_Eggerthella_64_6
In projects: NECEvent2014_5_8

Consensus taxonomy: Eggerthella  →  Eggerthellales  →  Coriobacteriia  →  Actinobacteria  →  Bacteria

Description

fragments of PC.diff merged with Eggerthella as in other (ESOM supported)

Displaying items 101-150 of 1015 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_8_scaffold_4696 175_008_scaffold_4696
Species: Eggerthella lenta (100%)
2 1621 bp 68.23 7.13 96.61
NECEvent2014_5_8_scaffold_4749 175_008_scaffold_4749
Species: Eggerthella lenta (100%)
2 1598 bp 64.64 7.13 85.98
NECEvent2014_5_8_scaffold_2792 175_008_scaffold_2792
Species: Eggerthella sp. HGA1 (80%)
5 2989 bp 61.93 7.13 92.24
NECEvent2014_5_8_scaffold_5449 175_008_scaffold_5449
Species: Eggerthella lenta (100%)
1 1326 bp 66.37 7.13 88.69
NECEvent2014_5_8_scaffold_6173 175_008_scaffold_6173
Genus: Eggerthella (66.67%)
3 1115 bp 61.97 7.13 96.59
NECEvent2014_5_8_scaffold_4632 175_008_scaffold_4632
Species: Eggerthella sp. HGA1 (100%)
2 1645 bp 62.98 7.11 90.82
NECEvent2014_5_8_scaffold_2708 175_008_scaffold_2708
Species: Eggerthella lenta (80%)
5 3086 bp 63.61 7.10 97.99
NECEvent2014_5_8_scaffold_5995 175_008_scaffold_5995
Species: Eggerthella sp. HGA1 (100%)
1 1162 bp 68.93 7.10 99.91
NECEvent2014_5_8_scaffold_1778 175_008_scaffold_1778
Species: Eggerthella lenta (100%)
4 4780 bp 50.21 7.09 99.29
NECEvent2014_5_8_scaffold_1815 175_008_scaffold_1815
Species: Eggerthella sp. HGA1 (66.67%)
3 4696 bp 67.08 7.09 95.83
NECEvent2014_5_8_scaffold_3676 175_008_scaffold_3676
Species: Eggerthella sp. HGA1 (66.67%)
3 2164 bp 61.78 7.07 81.79
NECEvent2014_5_8_scaffold_3812 175_008_scaffold_3812
Species: Peptoclostridium difficile (100%)
2 2079 bp 65.37 7.07 88.02
NECEvent2014_5_8_scaffold_1782 175_008_scaffold_1782
Species: Eggerthella lenta (100%)
3 4771 bp 64.62 7.07 91.55
NECEvent2014_5_8_scaffold_5069 175_008_scaffold_5069
Species: Eggerthella lenta (100%)
1 1466 bp 63.85 7.06 92.09
NECEvent2014_5_8_scaffold_2113 175_008_scaffold_2113
Species: Eggerthella sp. HGA1 (50%)
2 4049 bp 62.61 7.04 94.54
NECEvent2014_5_8_scaffold_3659 175_008_scaffold_3659
Species: Eggerthella lenta (75%)
4 2177 bp 66.10 7.03 93.43
NECEvent2014_5_8_scaffold_3134 175_008_scaffold_3134
Species: Eggerthella sp. HGA1 (100%)
2 2610 bp 66.78 7.01 94.25
NECEvent2014_5_8_scaffold_3205 175_008_scaffold_3205
Species: Eggerthella sp. HGA1 (100%)
1 2545 bp 64.13 7.01 99.96
NECEvent2014_5_8_scaffold_6341 175_008_scaffold_6341
Species: Eggerthella sp. HGA1 (100%)
2 1073 bp 67.47 6.99 92.26
NECEvent2014_5_8_scaffold_2030 175_008_scaffold_2030
Species: Eggerthella sp. HGA1 (50%)
4 4206 bp 59.49 6.99 86.59
NECEvent2014_5_8_scaffold_5932 175_008_scaffold_5932
Species: Eggerthella sp. HGA1 (100%)
1 1181 bp 64.52 6.99 99.83
NECEvent2014_5_8_scaffold_3403 175_008_scaffold_3403
Species: Eggerthella lenta (50%)
2 2363 bp 61.74 6.98 88.62
NECEvent2014_5_8_scaffold_6455 175_008_scaffold_6455
Species: Peptoclostridium difficile (100%)
1 1053 bp 69.99 6.98 99.72
NECEvent2014_5_8_scaffold_2459 175_008_scaffold_2459
Species: Peptoclostridium difficile (50%)
6 4604 bp 61.08 6.97 95.98
NECEvent2014_5_8_scaffold_4805 175_008_scaffold_4805
Species: Eggerthella sp. HGA1 (100%)
2 1571 bp 67.22 6.97 82.88
NECEvent2014_5_8_scaffold_3288 175_008_scaffold_3288
Species: Eggerthella lenta (100%)
2 2454 bp 68.30 6.97 81.91
NECEvent2014_5_8_scaffold_1584 175_008_scaffold_1584
Species: Eggerthella sp. HGA1 (71.43%)
7 6695 bp 57.51 6.97 82.76
NECEvent2014_5_8_scaffold_5637 175_008_scaffold_5637
Species: Eggerthella lenta (50%)
2 1272 bp 70.99 6.96 83.49
NECEvent2014_5_8_scaffold_5681 175_008_scaffold_5681
Species: Eggerthella lenta (66.67%)
3 1254 bp 64.99 6.94 89.47
NECEvent2014_5_8_scaffold_942 175_008_scaffold_942
Species: Eggerthella sp. HGA1 (50%)
8 8829 bp 64.87 6.93 87.77
NECEvent2014_5_8_scaffold_4990 175_008_scaffold_4990
Species: Eggerthella lenta (100%)
2 1496 bp 68.11 6.92 94.85
NECEvent2014_5_8_scaffold_5817 175_008_scaffold_5817
Species: Eggerthella lenta (66.67%)
3 1213 bp 60.59 6.92 83.84
NECEvent2014_5_8_scaffold_3096 175_008_scaffold_3096
Species: Eggerthella sp. HGA1 (66.67%)
3 2648 bp 65.37 6.91 84.40
NECEvent2014_5_8_scaffold_2709 175_008_scaffold_2709
Species: Eggerthella sp. HGA1 (50%)
2 3086 bp 62.61 6.90 94.78
NECEvent2014_5_8_scaffold_1133 175_008_scaffold_1133
Species: Eggerthella sp. HGA1 (62.5%)
8 7490 bp 64.29 6.89 89.92
NECEvent2014_5_8_scaffold_6373 175_008_scaffold_6373
Species: Eggerthella sp. HGA1 (100%)
1 1066 bp 67.82 6.89 94.84
NECEvent2014_5_8_scaffold_1822 175_008_scaffold_1822
Species: Eggerthella sp. HGA1 (66.67%)
3 4657 bp 67.94 6.89 87.93
NECEvent2014_5_8_scaffold_1084 175_008_scaffold_1084
Species: Eggerthella sp. HGA1 (66.67%)
9 7793 bp 66.52 6.89 85.50
NECEvent2014_5_8_scaffold_2123 175_008_scaffold_2123
Species: Eggerthella sp. HGA1 (60%)
5 4034 bp 67.48 6.88 86.86
NECEvent2014_5_8_scaffold_4184 175_008_scaffold_4184
Species: Eggerthella sp. HGA1 (66.67%)
3 1854 bp 58.85 6.88 84.95
NECEvent2014_5_8_scaffold_3312 175_008_scaffold_3312
Species: Eggerthella sp. HGA1 (50%)
4 2441 bp 63.17 6.88 81.73
NECEvent2014_5_8_scaffold_6474 175_008_scaffold_6474
Species: Eggerthella sp. HGA1 (50%)
2 1049 bp 56.34 6.86 98.38
NECEvent2014_5_8_scaffold_3032 175_008_scaffold_3032
Species: Eggerthella sp. HGA1 (100%)
3 2713 bp 63.18 6.86 81.83
NECEvent2014_5_8_scaffold_2214 175_008_scaffold_2214
Species: Eggerthella lenta (66.67%)
3 3852 bp 61.89 6.85 87.15
NECEvent2014_5_8_scaffold_5917 175_008_scaffold_5917
Species: Eggerthella sp. HGA1 (100%)
1 1185 bp 62.03 6.84 99.75
NECEvent2014_5_8_scaffold_3317 175_008_scaffold_3317
Species: Peptoclostridium difficile (66.67%)
3 2434 bp 66.89 6.84 93.43
NECEvent2014_5_8_scaffold_3159 175_008_scaffold_3159
Species: Eggerthella sp. HGA1 (50%)
2 2590 bp 66.87 6.83 72.63
NECEvent2014_5_8_scaffold_2672 175_008_scaffold_2672
Domain: Bacteria (50%)
4 3118 bp 61.71 6.83 98.81
NECEvent2014_5_8_scaffold_2965 175_008_scaffold_2965
Species: Eggerthella lenta (75%)
4 2789 bp 62.10 6.83 83.69
NECEvent2014_5_8_scaffold_4275 175_008_scaffold_4275
Species: Eggerthella lenta (100%)
2 1802 bp 63.43 6.83 72.09
Displaying items 101-150 of 1015 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.