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NECEvent2014_5_8_Eggerthella_1_3_5FAA-rel_64_6

NECEvent2014_5_8_Eggerthella_64_6
In projects: NECEvent2014_5_8

Consensus taxonomy: Eggerthella  →  Eggerthellales  →  Coriobacteriia  →  Actinobacteria  →  Bacteria

Description

fragments of PC.diff merged with Eggerthella as in other (ESOM supported)

Displaying items 51-100 of 1015 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_8_scaffold_6011 175_008_scaffold_6011
Species: Eggerthella lenta (100%)
1 1159 bp 67.39 7.51 82.83
NECEvent2014_5_8_scaffold_2285 175_008_scaffold_2285
Species: Eggerthella sp. HGA1 (66.67%)
3 3720 bp 65.03 7.50 81.13
NECEvent2014_5_8_scaffold_6073 175_008_scaffold_6073
Species: Eggerthella sp. HGA1 (50%)
2 1141 bp 67.66 7.49 98.86
NECEvent2014_5_8_scaffold_5138 175_008_scaffold_5138
Species: Eggerthella sp. HGA1 (100%)
2 1441 bp 63.15 7.49 79.32
NECEvent2014_5_8_scaffold_4023 175_008_scaffold_4023
Species: Eggerthella lenta (66.67%)
3 1945 bp 69.36 7.48 99.64
NECEvent2014_5_8_scaffold_2862 175_008_scaffold_2862
Species: Eggerthella lenta (100%)
4 2916 bp 66.87 7.46 84.88
NECEvent2014_5_8_scaffold_3850 175_008_scaffold_3850
Species: Eggerthella lenta (100%)
3 2055 bp 63.21 7.45 99.85
NECEvent2014_5_8_scaffold_2175 175_008_scaffold_2175
Species: Eggerthella lenta (75%)
4 3930 bp 63.10 7.44 70.38
NECEvent2014_5_8_scaffold_5054 175_008_scaffold_5054
Species: Eggerthella sp. HGA1 (100%)
2 1472 bp 63.45 7.44 79.28
NECEvent2014_5_8_scaffold_2549 175_008_scaffold_2549
Species: Eggerthella sp. HGA1 (100%)
4 3267 bp 58.52 7.44 93.48
NECEvent2014_5_8_scaffold_4940 175_008_scaffold_4940
Species: Eggerthella sp. HGA1 (100%)
3 1514 bp 70.15 7.43 90.95
NECEvent2014_5_8_scaffold_6275 175_008_scaffold_6275
Species: Eggerthella lenta (100%)
3 1092 bp 67.77 7.42 100.28
NECEvent2014_5_8_scaffold_2222 175_008_scaffold_2222
Genus: Eggerthella (80%)
5 3841 bp 60.45 7.42 86.62
NECEvent2014_5_8_scaffold_1022 175_008_scaffold_1022
Species: Eggerthella sp. HGA1 (60%)
10 8223 bp 61.18 7.42 85.37
NECEvent2014_5_8_scaffold_6445 175_008_scaffold_6445
Species: Eggerthella lenta (100%)
1 1055 bp 61.14 7.39 99.81
NECEvent2014_5_8_scaffold_6328 175_008_scaffold_6328
Species: Eggerthella sp. HGA1 (100%)
1 1076 bp 63.20 7.39 81.41
NECEvent2014_5_8_scaffold_4014 175_008_scaffold_4014
Order: Eggerthellales (66.67%)
3 1950 bp 67.28 7.38 100.15
NECEvent2014_5_8_scaffold_2775 175_008_scaffold_2775
Species: Eggerthella lenta (66.67%)
3 3008 bp 67.25 7.38 78.39
NECEvent2014_5_8_scaffold_1703 175_008_scaffold_1703
Species: Eggerthella lenta (83.33%)
6 4969 bp 60.98 7.37 78.91
NECEvent2014_5_8_scaffold_3525 175_008_scaffold_3525
Species: Eggerthella lenta (66.67%)
3 2282 bp 67.22 7.36 76.91
NECEvent2014_5_8_scaffold_2320 175_008_scaffold_2320
Species: Eggerthella sp. HGA1 (66.67%)
3 3666 bp 54.42 7.36 55.16
NECEvent2014_5_8_scaffold_3181 175_008_scaffold_3181
Species: Eggerthella lenta (66.67%)
3 2570 bp 59.81 7.35 91.52
NECEvent2014_5_8_scaffold_1930 175_008_scaffold_1930
Genus: Eggerthella (60%)
5 4407 bp 64.56 7.35 89.45
NECEvent2014_5_8_scaffold_5836 175_008_scaffold_5836
Species: Eggerthella lenta (50%)
2 1204 bp 66.69 7.35 81.48
NECEvent2014_5_8_scaffold_1962 175_008_scaffold_1962
Species: Eggerthella sp. HGA1 (50%)
4 4324 bp 64.48 7.35 85.41
NECEvent2014_5_8_scaffold_4709 175_008_scaffold_4709
Species: Eggerthella sp. HGA1 (100%)
1 1614 bp 56.32 7.34 82.53
NECEvent2014_5_8_scaffold_3619 175_008_scaffold_3619
Species: Eggerthella sp. HGA1 (100%)
1 2210 bp 66.65 7.33 99.91
NECEvent2014_5_8_scaffold_3929 175_008_scaffold_3929
Species: Eggerthella sp. HGA1 (50%)
2 2007 bp 64.72 7.32 81.32
NECEvent2014_5_8_scaffold_4274 175_008_scaffold_4274
Species: Eggerthella lenta (50%)
4 1803 bp 62.90 7.32 98.34
NECEvent2014_5_8_scaffold_3766 175_008_scaffold_3766
Species: Peptoclostridium difficile (100%)
2 2111 bp 58.88 7.32 36.67
NECEvent2014_5_8_scaffold_4447 175_008_scaffold_4447
Species: Eggerthella lenta (50%)
2 1724 bp 71.40 7.31 100.06
NECEvent2014_5_8_scaffold_5488 175_008_scaffold_5488
Species: Slackia heliotrinireducens (50%)
2 1314 bp 62.56 7.31 92.92
NECEvent2014_5_8_scaffold_6203 175_008_scaffold_6203
Species: Eggerthella lenta (100%)
1 1109 bp 61.05 7.30 99.82
NECEvent2014_5_8_scaffold_1436 175_008_scaffold_1436
Species: Eggerthella sp. HGA1 (66.67%)
6 5980 bp 65.30 7.30 91.51
NECEvent2014_5_8_scaffold_3817 175_008_scaffold_3817
Species: Peptoclostridium difficile (100%)
1 2075 bp 63.76 7.30 99.90
NECEvent2014_5_8_scaffold_1558 175_008_scaffold_1558
Species: Eggerthella lenta (50%)
4 5466 bp 63.57 7.30 78.65
NECEvent2014_5_8_scaffold_2624 175_008_scaffold_2624
Genus: Eggerthella (66.67%)
3 3162 bp 60.18 7.26 79.60
NECEvent2014_5_8_scaffold_5065 175_008_scaffold_5065
Species: Eggerthella lenta (50%)
4 1469 bp 59.56 7.25 81.48
NECEvent2014_5_8_scaffold_1186 175_008_scaffold_1186
Genus: Eggerthella (71.43%)
7 7177 bp 62.18 7.25 81.22
NECEvent2014_5_8_scaffold_1702 175_008_scaffold_1702
Order: Clostridiales (60%)
5 4973 bp 59.90 7.24 99.12
NECEvent2014_5_8_scaffold_6152 175_008_scaffold_6152
Species: Gordonibacter pamelaeae (50%)
2 1120 bp 53.48 7.23 83.57
NECEvent2014_5_8_scaffold_4816 175_008_scaffold_4816
Species: Eggerthella lenta (100%)
2 1564 bp 64.77 7.19 81.52
NECEvent2014_5_8_scaffold_4917 175_008_scaffold_4917
Species: Peptoclostridium difficile (50%)
2 1524 bp 65.09 7.19 92.72
NECEvent2014_5_8_scaffold_3532 175_008_scaffold_3532
Species: Eggerthella lenta (50%)
4 2276 bp 67.27 7.18 89.24
NECEvent2014_5_8_scaffold_1232 175_008_scaffold_1232
Species: Eggerthella sp. HGA1 (66.67%)
6 6919 bp 60.67 7.18 82.77
NECEvent2014_5_8_scaffold_3067 175_008_scaffold_3067
Species: Eggerthella lenta (60%)
5 2678 bp 67.51 7.17 98.13
NECEvent2014_5_8_scaffold_4671 175_008_scaffold_4671
Species: Eggerthella lenta (50%)
2 1633 bp 54.13 7.16 78.81
NECEvent2014_5_8_scaffold_1541 175_008_scaffold_1541
Class: Coriobacteriia (50%)
4 5527 bp 70.78 7.16 94.66
NECEvent2014_5_8_scaffold_2154 175_008_scaffold_2154
Species: Eggerthella lenta (75%)
4 3966 bp 67.78 7.15 100.83
NECEvent2014_5_8_scaffold_2896 175_008_scaffold_2896
Species: Eggerthella sp. HGA1 (66.67%)
3 2881 bp 63.94 7.13 87.68
Displaying items 51-100 of 1015 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.