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NECEvent2014_5_8_Eggerthella_1_3_5FAA-rel_64_6

NECEvent2014_5_8_Eggerthella_64_6
In projects: NECEvent2014_5_8

Consensus taxonomy: Eggerthella  →  Eggerthellales  →  Coriobacteriia  →  Actinobacteria  →  Bacteria

Description

fragments of PC.diff merged with Eggerthella as in other (ESOM supported)

Displaying items 351-400 of 1015 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_8_scaffold_6076 175_008_scaffold_6076
Species: Peptoclostridium difficile (100%)
1 1140 bp 64.39 6.18 85.79
NECEvent2014_5_8_scaffold_3717 175_008_scaffold_3717
Species: Enterorhabdus caecimuris (100%)
2 2140 bp 64.11 6.31 85.79
NECEvent2014_5_8_scaffold_2357 175_008_scaffold_2357
Species: Eggerthella lenta (66.67%)
3 3611 bp 69.23 5.11 85.82
NECEvent2014_5_8_scaffold_6375 175_008_scaffold_6375
Species: Eggerthella lenta (100%)
2 1066 bp 59.94 7.88 85.83
NECEvent2014_5_8_scaffold_1045 175_008_scaffold_1045
Species: Eggerthella sp. HGA1 (50%)
6 8063 bp 63.51 6.53 85.84
NECEvent2014_5_8_scaffold_1912 175_008_scaffold_1912
Species: Eggerthella sp. HGA1 (100%)
3 4451 bp 59.63 6.40 85.87
NECEvent2014_5_8_scaffold_4773 175_008_scaffold_4773
Species: Eggerthella sp. HGA1 (50%)
2 1586 bp 67.02 6.43 85.88
NECEvent2014_5_8_scaffold_1780 175_008_scaffold_1780
Species: Eggerthella sp. HGA1 (60%)
5 4777 bp 69.19 5.65 85.91
NECEvent2014_5_8_scaffold_1106 175_008_scaffold_1106
Species: Eggerthella lenta (60%)
5 7667 bp 63.47 6.14 85.91
NECEvent2014_5_8_scaffold_2497 175_008_scaffold_2497
Domain: Bacteria (60%)
5 3354 bp 63.60 5.81 85.96
NECEvent2014_5_8_scaffold_4749 175_008_scaffold_4749
Species: Eggerthella lenta (100%)
2 1598 bp 64.64 7.13 85.98
NECEvent2014_5_8_scaffold_4563 175_008_scaffold_4563
Species: Eggerthella lenta (66.67%)
3 1671 bp 65.47 6.82 86.00
NECEvent2014_5_8_scaffold_3062 175_008_scaffold_3062
Species: Eggerthella sp. HGA1 (66.67%)
3 2682 bp 63.16 4.59 86.02
NECEvent2014_5_8_scaffold_2876 175_008_scaffold_2876
Species: Olsenella sp. oral taxon 809 (60%)
5 2905 bp 64.48 5.94 86.02
NECEvent2014_5_8_scaffold_2377 175_008_scaffold_2377
Species: Eggerthella lenta (100%)
5 3581 bp 59.12 5.11 86.04
NECEvent2014_5_8_scaffold_2450 175_008_scaffold_2450
Species: Eggerthella lenta (66.67%)
3 3438 bp 63.41 5.67 86.04
NECEvent2014_5_8_scaffold_1709 175_008_scaffold_1709
Species: Eggerthella sp. HGA1 (75%)
4 4947 bp 67.43 5.34 86.05
NECEvent2014_5_8_scaffold_1728 175_008_scaffold_1728
Species: Eggerthella lenta (100%)
5 4910 bp 63.50 5.38 86.09
NECEvent2014_5_8_scaffold_2366 175_008_scaffold_2366
Species: Eggerthella lenta (50%)
2 3603 bp 62.98 5.37 86.09
NECEvent2014_5_8_scaffold_2396 175_008_scaffold_2396
Species: Eggerthella lenta (50%)
4 3543 bp 63.51 6.60 86.11
NECEvent2014_5_8_scaffold_4504 175_008_scaffold_4504
Species: Eggerthella lenta (100%)
1 1696 bp 68.87 7.61 86.14
NECEvent2014_5_8_scaffold_6217 175_008_scaffold_6217
Species: Eggerthella lenta (100%)
1 1107 bp 62.24 4.47 86.18
NECEvent2014_5_8_scaffold_1929 175_008_scaffold_1929
Species: Eggerthella lenta (66.67%)
3 4407 bp 63.04 5.72 86.18
NECEvent2014_5_8_scaffold_4429 175_008_scaffold_4429
Species: Eggerthella lenta (100%)
1 1730 bp 68.73 6.24 86.19
NECEvent2014_5_8_scaffold_1105 175_008_scaffold_1105
Species: Eggerthella lenta (66.67%)
9 7668 bp 62.27 6.03 86.19
NECEvent2014_5_8_scaffold_2568 175_008_scaffold_2568
Species: Peptoclostridium difficile (50%)
4 3230 bp 66.38 5.20 86.19
NECEvent2014_5_8_scaffold_3984 175_008_scaffold_3984
Order: Eggerthellales (75%)
4 1973 bp 60.92 6.23 86.21
NECEvent2014_5_8_scaffold_3773 175_008_scaffold_3773
Species: Eggerthella lenta (66.67%)
3 2107 bp 60.99 5.91 86.28
NECEvent2014_5_8_scaffold_2454 175_008_scaffold_2454
Species: Eggerthella lenta (60%)
5 3431 bp 64.97 5.38 86.30
NECEvent2014_5_8_scaffold_4352 175_008_scaffold_4352
Species: Eggerthella sp. HGA1 (100%)
1 1768 bp 70.25 6.11 86.37
NECEvent2014_5_8_scaffold_3051 175_008_scaffold_3051
Species: Eggerthella sp. HGA1 (50%)
2 2695 bp 66.64 5.23 86.38
NECEvent2014_5_8_scaffold_1231 175_008_scaffold_1231
Species: Eggerthella lenta (77.78%)
9 6931 bp 64.39 5.30 86.39
NECEvent2014_5_8_scaffold_6019 175_008_scaffold_6019
Species: Peptoclostridium difficile (50%)
2 1156 bp 64.62 5.06 86.42
NECEvent2014_5_8_scaffold_3955 175_008_scaffold_3955
Species: Gordonibacter pamelaeae (50%)
4 1989 bp 56.86 5.43 86.43
NECEvent2014_5_8_scaffold_1060 175_008_scaffold_1060
Species: Eggerthella sp. HGA1 (50%)
8 7957 bp 61.34 6.79 86.45
NECEvent2014_5_8_scaffold_5922 175_008_scaffold_5922
Species: Eggerthella sp. HGA1 (100%)
1 1183 bp 67.46 5.58 86.48
NECEvent2014_5_8_scaffold_3844 175_008_scaffold_3844
Species: Eggerthella sp. HGA1 (50%)
2 2057 bp 63.10 5.91 86.49
NECEvent2014_5_8_scaffold_5788 175_008_scaffold_5788
Species: Eggerthella sp. HGA1 (100%)
1 1221 bp 55.77 5.16 86.49
NECEvent2014_5_8_scaffold_4112 175_008_scaffold_4112
Species: Eggerthella sp. HGA1 (66.67%)
3 1887 bp 64.33 4.77 86.49
NECEvent2014_5_8_scaffold_1836 175_008_scaffold_1836
Species: Eggerthella lenta (75%)
4 4620 bp 61.36 6.46 86.49
NECEvent2014_5_8_scaffold_3610 175_008_scaffold_3610
Species: Eggerthella sp. HGA1 (100%)
2 2219 bp 65.16 6.35 86.53
NECEvent2014_5_8_scaffold_1966 175_008_scaffold_1966
Species: Eggerthella lenta (75%)
4 4319 bp 66.22 5.11 86.55
NECEvent2014_5_8_scaffold_1701 175_008_scaffold_1701
Species: Eggerthella sp. HGA1 (57.14%)
7 4977 bp 63.95 6.00 86.56
NECEvent2014_5_8_scaffold_1478 175_008_scaffold_1478
Species: Eggerthella sp. HGA1 (66.67%)
6 5798 bp 66.44 5.56 86.56
NECEvent2014_5_8_scaffold_2030 175_008_scaffold_2030
Species: Eggerthella sp. HGA1 (50%)
4 4206 bp 59.49 6.99 86.59
NECEvent2014_5_8_scaffold_1125 175_008_scaffold_1125
Species: Eggerthella lenta (100%)
7 7513 bp 63.54 6.73 86.61
NECEvent2014_5_8_scaffold_2222 175_008_scaffold_2222
Genus: Eggerthella (80%)
5 3841 bp 60.45 7.42 86.62
NECEvent2014_5_8_scaffold_3294 175_008_scaffold_3294
Genus: Eggerthella (66.67%)
3 2452 bp 63.38 5.93 86.62
NECEvent2014_5_8_scaffold_1789 175_008_scaffold_1789
Species: Eggerthella lenta (75%)
4 4749 bp 65.63 6.76 86.67
NECEvent2014_5_8_scaffold_3624 175_008_scaffold_3624
Species: Eggerthella sp. HGA1 (100%)
3 2207 bp 61.35 5.78 86.72
Displaying items 351-400 of 1015 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.