ggKbase home page

NECEvent2014_5_8_scaffold_182

Alias: 175_008_scaffold_182

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_182_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1717
DNA (1716bp) protein (572aa)
Adhesin n=1 Tax=Escherichia coli HVH 130 (4-7036876) RepID=T7ACA1_ECOLX rbh
ycgV; putative adhesin
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:ESA91443.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheri
NECEvent2014_5_8_scaffold_182_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1729..2451
DNA (723bp) protein (241aa)
Putative adhesion and penetration protein n=1 Tax=Escherichia coli TA143 RepID=F4U675_ECOLX
ycgV; putative adhesin
Putative adhesin putative autotransporter {ECO:0000313|EMBL:CAR12706.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sour
NECEvent2014_5_8_scaffold_182_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2551..4470)
DNA (1920bp) protein (640aa)
DNA-binding transcriptional regulator, dihydroxyacetone metabolism n=69 Tax=Escherichia coli RepID=B7N412_ECOLU rbh
dhaR; DNA-binding transcriptional regulator DhaR
PTS-dependent dihydroxyacetone kinase operon regulatory protein, DhaR {ECO:0000313|EMBL:ESA91444.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobact
NECEvent2014_5_8_scaffold_182_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4698..5768
DNA (1071bp) protein (357aa)
Dihydroxyacetone kinase, N-terminal domain n=71 Tax=Escherichia coli RepID=B7N411_ECOLU rbh
dhaK; dihydroxyacetone kinase subunit DhaK
Dihydroxyacetone kinase, N-terminal domain {ECO:0000313|EMBL:CAR12704.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
NECEvent2014_5_8_scaffold_182_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5779..6411
DNA (633bp) protein (211aa)
Dihydroxyacetone kinase, L subunit {ECO:0000313|EMBL:EFJ75435.1}; EC=2.7.-.- {ECO:0000313|EMBL:EFJ75435.1};; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ent
Dihydroxyacetone kinase, C-terminal domain n=72 Tax=Escherichia coli RepID=B7N410_ECOLU rbh
dhaL; dihydroxyacetone kinase subunit DhaL rbh
NECEvent2014_5_8_scaffold_182_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6422..7987
DNA (1566bp) protein (522aa)
Fused dihydroxyacetone-specific PTS enzymes: HPr component EI component n=76 Tax=Escherichia coli RepID=B7N409_ECOLU rbh
dhaH; dihydroxyacetone kinase subunit M
Dihydroxyacetone kinase, phosphotransfer subunit {ECO:0000313|EMBL:ESD89261.1}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
NECEvent2014_5_8_scaffold_182_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7947..9551
DNA (1605bp) protein (535aa)
treA; trehalase (EC:3.2.1.28)
Periplasmic trehalase {ECO:0000255|HAMAP-Rule:MF_01060}; EC=3.2.1.28 {ECO:0000255|HAMAP-Rule:MF_01060};; Alpha,alpha-trehalase {ECO:0000255|HAMAP-Rule:MF_01060}; Alpha,alpha-trehalose glucohydrolase {
Periplasmic trehalase n=7 Tax=Escherichia coli RepID=D7X2R9_ECOLX rbh
NECEvent2014_5_8_scaffold_182_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9758..10780
DNA (1023bp) protein (341aa)
Periplasmic binding protein n=74 Tax=Escherichia coli RepID=D7X2R7_ECOLX rbh
putative ABC transporter periplasmic binding protein rbh
Putative ABC transporter periplasmic binding protein {ECO:0000313|EMBL:CAR12700.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheric
NECEvent2014_5_8_scaffold_182_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10780..11760
DNA (981bp) protein (327aa)
Iron(III) ABC transporter n=71 Tax=Escherichia coli RepID=D6IP66_ECOLX rbh
putative ABC transporter permease protein rbh
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EFJ75429.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteria
NECEvent2014_5_8_scaffold_182_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11757..12515
DNA (759bp) protein (253aa)
putative ABC transporter ATP-binding protein (EC:3.6.3.28)
Putative ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CAR12698.1}; EC=3.6.3.28 {ECO:0000313|EMBL:CAR12698.1};; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobact
Iron(III) ABC transporter n=64 Tax=Escherichia coli RepID=D6IP65_ECOLX rbh
NECEvent2014_5_8_scaffold_182_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12525..13337
DNA (813bp) protein (271aa)
Uncharacterized protein n=81 Tax=Escherichia coli RepID=B7N404_ECOLU rbh
putative SAM-dependent methyltransferase rbh
Uncharacterized protein {ECO:0000313|EMBL:CAR12697.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_8_scaffold_182_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13334..14188
DNA (855bp) protein (285aa)
modD; molybdenum transport protein ModD (EC:2.4.2.19)
Quinolinate phosphoribosyl transferase, C-terminal domain protein {ECO:0000313|EMBL:EFJ75426.1}; EC=2.4.2.19 {ECO:0000313|EMBL:EFJ75426.1};; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteo
Molybdenum transporter ModD n=72 Tax=Escherichia coli RepID=D6IP63_ECOLX rbh
NECEvent2014_5_8_scaffold_182_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14214..16184
DNA (1971bp) protein (657aa)
Iron complex outer membrane receptor protein n=71 Tax=Escherichia coli RepID=D7JMS3_ECOLX rbh
prrA; putative outer membrane receptor rbh
TonB-dependent receptor {ECO:0000313|EMBL:EFJ75425.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_8_scaffold_182_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16234..16488)
DNA (255bp) protein (85aa)
UPF0410 protein ymge n=813 Tax=Enterobacteriaceae RepID=E2QKX1_ECOLX
hypothetical protein
Transglycosylase associated protein {ECO:0000313|EMBL:ESA91457.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
NECEvent2014_5_8_scaffold_182_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16689..17423
DNA (735bp) protein (245aa)
Flagellar brake protein YcgR n=72 Tax=Escherichia coli RepID=B7N400_ECOLU rbh
ycgR; protein involved in flagellar function
Flagellar brake protein YcgR {ECO:0000256|HAMAP-Rule:MF_01457}; Cyclic di-GMP binding protein YcgR {ECO:0000256|HAMAP-Rule:MF_01457}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteri
NECEvent2014_5_8_scaffold_182_16
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17425..18036)
DNA (612bp) protein (204aa)
Endo-type membrane-bound lytic murein transglycosylase A {ECO:0000256|HAMAP-Rule:MF_01381}; EC=4.2.2.n2 {ECO:0000256|HAMAP-Rule:MF_01381};; Peptidoglycan lytic endotransglycosylase {ECO:0000256|HAMAP-
Endo-type membrane-bound lytic murein transglycosylase A n=622 Tax=Enterobacteriaceae RepID=EMTA_ECO55 rbh
emtA; Endotype membrane-bound lytic murein transglycosylase A precursor
NECEvent2014_5_8_scaffold_182_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18136..19050
DNA (915bp) protein (305aa)
ldcA; L,D-carboxypeptidase A (EC:3.4.17.13)
Muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:EFJ75421.1}; EC=3.4.17.13 {ECO:0000313|EMBL:EFJ75421.1};; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales
L,D-carboxypeptidase A n=71 Tax=Escherichia coli RepID=B7N3Z8_ECOLU rbh
NECEvent2014_5_8_scaffold_182_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19145..20881
DNA (1737bp) protein (579aa)
K(+)/H(+) antiporter NhaP2 n=1094 Tax=Enterobacteriaceae RepID=NHAP2_ECO24 rbh
K(+)/H(+) antiporter NhaP2 {ECO:0000256|HAMAP-Rule:MF_01075, ECO:0000256|SAAS:SAAS00010739}; Potassium/proton antiporter NhaP2 {ECO:0000256|HAMAP-Rule:MF_01075}; TaxID=1125642 species="Bacteria; Prote
cvrA; cell volume regulation protein A
NECEvent2014_5_8_scaffold_182_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20983..21135)
DNA (153bp) protein (51aa)
Predicted protein n=1 Tax=Escherichia coli FVEC1302 RepID=D7JMR7_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESA91463.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_8_scaffold_182_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21530..22966
DNA (1437bp) protein (479aa)
Uncharacterized protein n=71 Tax=Escherichia coli RepID=B7N3Z5_ECOLU rbh
hypothetical protein
Leucine Rich repeat-containing domain protein {ECO:0000313|EMBL:ESA91465.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_5_8_scaffold_182_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23134..24204)
DNA (1071bp) protein (357aa)
dadX; alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=1169339 species="Bacteria; Proteo
Alanine racemase n=386 Tax=Enterobacteriaceae RepID=J7QQ54_ECOLX rbh
NECEvent2014_5_8_scaffold_182_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24214..25512)
DNA (1299bp) protein (433aa)
D-amino acid dehydrogenase small subunit (EC:1.4.99.1)
D-amino acid dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01202}; EC=1.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01202};; TaxID=556266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; En
D-amino acid dehydrogenase small subunit n=765 Tax=Enterobacteriaceae RepID=DADA_ECO24 rbh
NECEvent2014_5_8_scaffold_182_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25842..27374
DNA (1533bp) protein (511aa)
SpoVR family protein n=665 Tax=Enterobacteriaceae RepID=B5YXL2_ECO5E rbh
ycgB; SpoVR family protein
SpoVR like family protein {ECO:0000313|EMBL:EMU70619.1}; TaxID=1116135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_5_8_scaffold_182_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27425..28144)
DNA (720bp) protein (240aa)
Fatty acid metabolism regulator protein n=1391 Tax=Enterobacteriaceae RepID=FADR_ECO24 rbh
fadR; fatty acid metabolism regulator
Fatty acid metabolism regulator protein {ECO:0000256|HAMAP-Rule:MF_00696, ECO:0000256|SAAS:SAAS00002480}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Entero
NECEvent2014_5_8_scaffold_182_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28366..29907
DNA (1542bp) protein (514aa)
Na(+)/H(+) antiporter NhaB n=849 Tax=Enterobacteriaceae RepID=NHAB_ECO24 rbh
nhaB; Na(+)/H(+) antiporter NhaB
Na(+)/H(+) antiporter NhaB {ECO:0000256|HAMAP-Rule:MF_01599, ECO:0000256|SAAS:SAAS00088125}; Sodium/proton antiporter NhaB {ECO:0000256|HAMAP-Rule:MF_01599}; TaxID=1169376 species="Bacteria; Proteobac
NECEvent2014_5_8_scaffold_182_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30053..30583
DNA (531bp) protein (177aa)
Disulfide bond formation protein B n=816 Tax=Enterobacteriaceae RepID=DSBB_ECO57 rbh
disulfide bond formation protein B
Disulfide bond formation protein B {ECO:0000256|HAMAP-Rule:MF_00286}; Disulfide oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00286}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; E
NECEvent2014_5_8_scaffold_182_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30629..31897)
DNA (1269bp) protein (423aa)
DNA polymerase V, subunit C n=73 Tax=Escherichia coli RepID=B7N3Y8_ECOLU rbh
umuC; DNA polymerase V subunit UmuC
DNA-directed DNA polymerase {ECO:0000313|EMBL:EGP25466.1}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_5_8_scaffold_182_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31897..32316)
DNA (420bp) protein (140aa)
Protein umuD {ECO:0000313|EMBL:KDZ16402.1}; EC=3.4.21.- {ECO:0000313|EMBL:KDZ16402.1};; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esc
Protein UmuD n=984 Tax=Enterobacteriaceae RepID=UMUD_ECO57
umuD; DNA polymerase V subunit UmuD
NECEvent2014_5_8_scaffold_182_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32688..33599
DNA (912bp) protein (304aa)
Hemolysin activation protein n=2 Tax=Escherichia coli RepID=V8JHK4_ECOLX rbh
hlyE; hemolysin E
Hemolysin E, chromosomal {ECO:0000313|EMBL:EOV06454.1}; TaxID=1169355 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_5_8_scaffold_182_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33806..34252)
DNA (447bp) protein (149aa)
UPF0260 protein YcgN n=914 Tax=Enterobacteriaceae RepID=YCGN_ECO24 rbh
hypothetical protein
UPF0260 protein YcgN {ECO:0000256|HAMAP-Rule:MF_00676}; TaxID=1182702 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
Displaying items 1-30 of 59 in total

View Taxonomy