ggKbase home page

NECEvent2014_5_8_scaffold_300

Alias: 175_008_scaffold_300

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_300_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..3564)
DNA (3564bp) protein (1188aa)
Adhesin n=47 Tax=Escherichia coli RepID=L2U9H8_ECOLX rbh
Putative invasin {ECO:0000313|EMBL:CAR13505.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:
putative invasin
NECEvent2014_5_8_scaffold_300_trna_5
unknown

Not on your lists

comp(3853..3925)
DNA (73bp)
transferRNA
NECEvent2014_5_8_scaffold_300_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3888..4640)
DNA (753bp) protein (251aa)
Protein MtfA n=54 Tax=Escherichia coli RepID=MTFA_ECOLU rbh
yeeI; hypothetical protein
Protein MtfA {ECO:0000255|HAMAP-Rule:MF_01593}; Mlc titration factor A {ECO:0000255|HAMAP-Rule:MF_01593}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Entero
NECEvent2014_5_8_scaffold_300_trna_1
unknown

Not on your lists

4734..4820
DNA (87bp)
transferRNA
NECEvent2014_5_8_scaffold_300_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5128..5814)
DNA (687bp) protein (229aa)
Ribulose-phosphate 3-epimerase n=84 Tax=Escherichia coli RepID=B1IZT9_ECOLC rbh
hypothetical protein
YodA {ECO:0000313|EMBL:ESA75814.1}; TaxID=1268979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907357.;"
NECEvent2014_5_8_scaffold_300_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6050..6685)
DNA (636bp) protein (212aa)
Sulfoxide reductase heme-binding subunit YedZ n=59 Tax=Escherichia coli RepID=YEDZ_ECOLU rbh
yedZ; putative sulfite oxidase subunit YedZ
Sulfoxide reductase heme-binding subunit YedZ {ECO:0000255|HAMAP-Rule:MF_01207}; Flavocytochrome YedZ {ECO:0000255|HAMAP-Rule:MF_01207}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobact
NECEvent2014_5_8_scaffold_300_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6686..7690)
DNA (1005bp) protein (335aa)
Sulfoxide reductase catalytic subunit YedY {ECO:0000255|HAMAP-Rule:MF_01206}; EC=1.8.-.- {ECO:0000255|HAMAP-Rule:MF_01206};; Flags: Precursor;; TaxID=585056 species="Bacteria; Proteobacteria; Gammapro
Sulfoxide reductase catalytic subunit YedY n=55 Tax=Escherichia coli RepID=YEDY_ECOLU rbh
yedY; putative sulfite oxidase subunit YedY rbh
NECEvent2014_5_8_scaffold_300_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7799..8212)
DNA (414bp) protein (138aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU3
5-hydroxyisourate hydrolase n=704 Tax=Enterobacteriaceae RepID=HIUH_ECO57
yedX; hypothetical protein
NECEvent2014_5_8_scaffold_300_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8234..9016
DNA (783bp) protein (261aa)
Heavy metal response regulator n=77 Tax=Enterobacteriaceae RepID=B1LQP0_ECOSM rbh
transcriptional regulatory protein YedW
Heavy metal response regulator {ECO:0000313|EMBL:EFJ83392.1}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_5_8_scaffold_300_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9016..10374
DNA (1359bp) protein (453aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriace
Sensory kinase in two-component regulatory system with YedW n=63 Tax=Escherichia coli RepID=B7NBV9_ECOLU rbh
yedV; sensory kinase in two-component regulatory system with YedW rbh
NECEvent2014_5_8_scaffold_300_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10482..11333)
DNA (852bp) protein (284aa)
Molecular chaperone Hsp31 and glyoxalase 3 {ECO:0000256|HAMAP-Rule:MF_01046}; EC=4.2.1.130 {ECO:0000256|HAMAP-Rule:MF_01046};; Glyoxalase III {ECO:0000256|HAMAP-Rule:MF_01046}; Holdase {ECO:0000256|HA
Molecular chaperone Hsp31 and glyoxalase 3 n=179 Tax=Enterobacteriaceae RepID=HCHA_ECO81 rbh
hchA; chaperone protein HchA
NECEvent2014_5_8_scaffold_300_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11589..11855
DNA (267bp) protein (89aa)
Uncharacterized protein n=8 Tax=Escherichia coli RepID=U9Z1Q7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESA79491.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
NECEvent2014_5_8_scaffold_300_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11856..12851)
DNA (996bp) protein (332aa)
Porin OmpN n=56 Tax=Escherichia coli RepID=B7NBV7_ECOLU rbh
porin OmpN
Porin OmpN {ECO:0000313|EMBL:CAR13447.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H1
NECEvent2014_5_8_scaffold_300_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13110..13199
DNA (90bp) protein (30aa)
Uncharacterized protein n=46 Tax=Escherichia coli RepID=L2UBL8_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ETJ28620.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_8_scaffold_300_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13417..13782
DNA (366bp) protein (122aa)
Inner membrane protein YedR n=43 Tax=Escherichia coli RepID=YEDR_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK47197.1}; TaxID=475609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_8_scaffold_300_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13822..14517
DNA (696bp) protein (232aa)
Uncharacterized protein n=64 Tax=Escherichia coli RepID=I4UPL8_ECOLX rbh
yedJ; hypothetical protein
Putative metal-dependent phosphohydrolase {ECO:0000313|EMBL:CAR13445.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sour
NECEvent2014_5_8_scaffold_300_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14584..16002
DNA (1419bp) protein (473aa)
dcm; DNA cytosine methylase (EC:2.1.1.37)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterial
Cytosine-specific methyltransferase n=55 Tax=Escherichia coli RepID=B7NBV4_ECOLU rbh
NECEvent2014_5_8_scaffold_300_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15983..16453
DNA (471bp) protein (157aa)
DNA mismatch endonuclease of very short patch repair {ECO:0000313|EMBL:CAR13443.1}; EC=3.1.-.- {ECO:0000313|EMBL:CAR13443.1};; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ente
DNA mismatch endonuclease of very short patch repair n=61 Tax=Escherichia coli RepID=B7NBV3_ECOLU rbh
vsr; DNA mismatch endonuclease of very short patch repair rbh
NECEvent2014_5_8_scaffold_300_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16442..17362)
DNA (921bp) protein (307aa)
Uncharacterized protein n=63 Tax=Escherichia coli RepID=B7NBV2_ECOLU rbh
yedA; hypothetical protein rbh
Blue pigment (Indigoidine) exporter {ECO:0000313|EMBL:EQX88061.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
NECEvent2014_5_8_scaffold_300_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17535..18452
DNA (918bp) protein (306aa)
Uncharacterized protein n=307 Tax=Enterobacteriaceae RepID=B7MCL3_ECO45 rbh
yedI; hypothetical protein
Inner membrane protein yedI {ECO:0000313|EMBL:EOV98149.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_5_8_scaffold_300_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18531..18713
DNA (183bp) protein (61aa)
Uncharacterized protein n=200 Tax=Enterobacteriaceae RepID=B6I103_ECOSE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFF13265.2}; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_5_8_scaffold_300_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18884..20578
DNA (1695bp) protein (565aa)
Cellulose synthesis regulatory protein n=47 Tax=Escherichia coli RepID=L2UAP5_ECOLX rbh
yedQ; putative diguanylate cyclase rbh
Putative diguanylate cyclase {ECO:0000313|EMBL:CAR13438.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_5_8_scaffold_300_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20575..21390)
DNA (816bp) protein (272aa)
yedP; mannosyl-3-phosphoglycerate phosphatase (EC:3.1.3.70) rbh
Putative mannosyl-3-phosphoglycerate phosphatase {ECO:0000255|HAMAP-Rule:MF_00617}; Short=MPGP {ECO:0000255|HAMAP-Rule:MF_00617};; EC=3.1.3.70 {ECO:0000255|HAMAP-Rule:MF_00617};; TaxID=585056 species=
Putative mannosyl-3-phosphoglycerate phosphatase n=67 Tax=Escherichia coli RepID=MPGP_ECOLU rbh
NECEvent2014_5_8_scaffold_300_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21688..21915)
DNA (228bp) protein (76aa)
Uncharacterized protein YodD n=1372 Tax=Enterobacteriaceae RepID=YODD_ECOL6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZJ40955.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_8_scaffold_300_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22078..22266
DNA (189bp) protein (63aa)
Protein DsrB n=3 Tax=Escherichia coli RepID=E9XIP5_ECOLX
dsrB; DsrB protein
Protein DsrB {ECO:0000256|HAMAP-Rule:MF_01549, ECO:0000256|SAAS:SAAS00024808}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
NECEvent2014_5_8_scaffold_300_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22310..22933)
DNA (624bp) protein (208aa)
Transcriptional regulatory protein RcsA n=429 Tax=Escherichia coli RepID=RCSA_ECO57 rbh
rcsA; Colanic acid capsular biosynthesis activation protein A
Transcriptional regulatory protein RcsA {ECO:0000256|HAMAP-Rule:MF_00982}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
NECEvent2014_5_8_scaffold_300_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23223..24008)
DNA (786bp) protein (262aa)
Flagellar biosynthetic protein fliR n=260 Tax=Escherichia coli RepID=A1AC99_ECOK1 rbh
fliR; flagellar biosynthesis protein FliR
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_5_8_scaffold_300_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24017..24286)
DNA (270bp) protein (90aa)
Flagellar biosynthetic protein FliQ n=1346 Tax=Enterobacteriaceae RepID=FLIQ_ECO57
fliQ; Flagellar biosynthesis protein
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:EHU46305.1}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_5_8_scaffold_300_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24296..25033)
DNA (738bp) protein (246aa)
fliP; flagellar biosynthesis protein FliP (EC:3.1.1.3) rbh
Flagellar biosynthetic protein FliP n=325 Tax=Enterobacteriaceae RepID=B1IZW1_ECOLC rbh
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:EHU44906.1}; TaxID=868140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_5_8_scaffold_300_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25033..25398)
DNA (366bp) protein (122aa)
Flagellar protein FliO n=335 Tax=Enterobacteriaceae RepID=FLIO_ECOLI
fliO; flagellar biosynthesis protein FliO
Flagellar biosynthetic protein FliO {ECO:0000313|EMBL:ESA79510.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
Displaying items 1-30 of 80 in total

View Taxonomy