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NECEvent2014_5_8_scaffold_569

Alias: 175_008_scaffold_569

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Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_569_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19..762)
DNA (744bp) protein (248aa)
tRNA (cmo5U34)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01589}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_01589};; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterial
tRNA (cmo5U34)-methyltransferase n=73 Tax=Escherichia coli RepID=CMOA_ECOLU rbh
yecO; AdoMet-dependent methyltransferase rbh
NECEvent2014_5_8_scaffold_569_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(803..1198)
DNA (396bp) protein (132aa)
Inner membrane protein YecN n=1087 Tax=Enterobacteriaceae RepID=YECN_ECOL6
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ESA85982.1}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_8_scaffold_569_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1251..2069)
DNA (819bp) protein (273aa)
Uncharacterized protein n=66 Tax=Escherichia coli RepID=B7NBL9_ECOLU rbh
yecE; hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EFJ73145.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_8_scaffold_569_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2066..2632)
DNA (567bp) protein (189aa)
Isochorismatase family protein YecD n=86 Tax=Escherichia coli RepID=F4V318_ECOLX rbh
yecD; hypothetical protein rbh
Putative hydrolase {ECO:0000313|EMBL:CAR13358.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O1
NECEvent2014_5_8_scaffold_569_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2772..4433
DNA (1662bp) protein (554aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=271 Tax=Enterobacteriaceae RepID=SYD_ECO24
Aspartate--tRNA ligase {ECO:0000313|EMBL:ESD91457.1}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_8_scaffold_569_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4435..4878
DNA (444bp) protein (148aa)
dATP pyrophosphohydrolase n=72 Tax=Escherichia coli RepID=B7NBL6_ECOLU
ntpA; dATP pyrophosphohydrolase
Dihydroneopterin triphosphate pyrophosphatase {ECO:0000313|EMBL:ESA79589.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_5_8_scaffold_569_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4907..5647
DNA (741bp) protein (247aa)
Probable transcriptional regulatory protein YebC n=1110 Tax=Enterobacteriaceae RepID=YEBC_ECO57 rbh
yebC; hypothetical protein
Probable transcriptional regulatory protein YebC {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheri
NECEvent2014_5_8_scaffold_569_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5682..6203
DNA (522bp) protein (174aa)
ruvC; crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
Crossover junction endodeoxyribonuclease RuvC n=1327 Tax=Enterobacteriaceae RepID=RUVC_ECO27 rbh
NECEvent2014_5_8_scaffold_569_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6205..6807)
DNA (603bp) protein (201aa)
Uncharacterized protein n=83 Tax=Escherichia coli RepID=B7NBL3_ECOLU rbh
yebB; hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ESA79592.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_8_scaffold_569_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7095..7484
DNA (390bp) protein (130aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
Holliday junction DNA helicase RuvA n=1 Tax=Escherichia coli ECA-0157 RepID=V6P5P8_ECOLX
ruvA; Holliday junction DNA helicase RuvA
NECEvent2014_5_8_scaffold_569_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7493..8503
DNA (1011bp) protein (337aa)
ruvB; holliday junction ATP-dependent DNA helicase RuvB (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria
Holliday junction ATP-dependent DNA helicase RuvB n=313 Tax=Escherichia RepID=RUVB_ECO27 rbh
NECEvent2014_5_8_scaffold_569_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8655..9440)
DNA (786bp) protein (262aa)
Zinc uptake ABC transporter, permease protein ZnuB n=314 Tax=Enterobacteriaceae RepID=B1LD12_ECOSM rbh
znuB; zinc uptake ABC transporter permease ZnuB
High-affinity zinc transporter membrane component {ECO:0000313|EMBL:ESD77139.1}; TaxID=1268995 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichi
NECEvent2014_5_8_scaffold_569_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9437..10192)
DNA (756bp) protein (252aa)
Zinc import ATP-binding protein ZnuC {ECO:0000256|HAMAP-Rule:MF_01725}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01725};; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacter
Zinc transporter subunit: ATP-binding component of ABC superfamily n=75 Tax=Escherichia coli RepID=B7NBK9_ECOLU rbh
znuC; high-affinity zinc transporter ATPase
NECEvent2014_5_8_scaffold_569_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10217..11203
DNA (987bp) protein (329aa)
High-affinity zinc uptake system protein znuA n=143 Tax=Escherichia coli RepID=Q8CVZ4_ECOL6 rbh
High-affinity zinc transporter periplasmic component {ECO:0000313|EMBL:ESA79597.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheri
znuA; high-affinity zinc uptake system protein ZnuA precursor
NECEvent2014_5_8_scaffold_569_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11219..12541
DNA (1323bp) protein (441aa)
Murein DD-endopeptidase MepM n=1308 Tax=Bacteria RepID=MEPM_ECOL6 rbh
yebA; hypothetical protein
LysM domain protein {ECO:0000313|EMBL:EHU23514.1}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli D
NECEvent2014_5_8_scaffold_569_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12661..13632
DNA (972bp) protein (324aa)
Lipid A biosynthesis myristoyltransferase {ECO:0000256|HAMAP-Rule:MF_01944}; EC=2.3.1.243 {ECO:0000256|HAMAP-Rule:MF_01944};; Kdo(2)-lauroyl-lipid IV(A) myristoyltransferase {ECO:0000256|HAMAP-Rule:MF
Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase n=587 Tax=Enterobacteriaceae RepID=MSBB_ECOLI rbh
lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase
NECEvent2014_5_8_scaffold_569_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13764..13853)
DNA (90bp) protein (30aa)
pykA; pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriacea
Pyruvate kinase n=1 Tax=Escherichia coli P0302293.9 RepID=N3TPB4_ECOLX
NECEvent2014_5_8_scaffold_569_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13853..15067)
DNA (1215bp) protein (405aa)
pykA; pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriace
NECEvent2014_5_8_scaffold_569_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15195..16064)
DNA (870bp) protein (290aa)
Uncharacterized protein n=612 Tax=Enterobacteriaceae RepID=C3T5V2_ECOLX rbh
yebK; DNA-binding transcriptional regulator HexR
Helix-turn-helix domain, rpiR family protein {ECO:0000313|EMBL:KEL68400.1}; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_5_8_scaffold_569_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16087..16236
DNA (150bp) protein (50aa)
Uncharacterized protein n=1088 Tax=Enterobacteriaceae RepID=B1LD19_ECOSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIG82277.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_8_scaffold_569_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16402..17364
DNA (963bp) protein (321aa)
zwf; glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0
Glucose-6-phosphate 1-dehydrogenase n=79 Tax=Escherichia RepID=A1AC13_ECOK1
NECEvent2014_5_8_scaffold_569_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17487..17678
DNA (192bp) protein (64aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Salmonella choleraesuis (strain SC-B67) RepID=Q57NB4_SALCH
NECEvent2014_5_8_scaffold_569_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17913..19724
DNA (1812bp) protein (604aa)
Phosphogluconate dehydratase {ECO:0000313|EMBL:EZJ98704.1}; EC=4.2.1.12 {ECO:0000313|EMBL:EZJ98704.1};; TaxID=1444134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterob
edd; phosphogluconate dehydratase (EC:4.2.1.12)
Phosphogluconate dehydratase n=808 Tax=Enterobacteriaceae RepID=EDD_ECO57 rbh
NECEvent2014_5_8_scaffold_569_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19761..20402
DNA (642bp) protein (214aa)
KHG/KDPG aldolase {ECO:0000313|EMBL:EFK52011.1}; EC=4.1.2.14 {ECO:0000313|EMBL:EFK52011.1};; EC=4.1.3.16 {ECO:0000313|EMBL:EFK52011.1};; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobact
KHG/KDPG aldolase n=1275 Tax=Enterobacteriaceae RepID=ALKH_ECO57 rbh
eda; KHG/KDPG aldolase
NECEvent2014_5_8_scaffold_569_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20392..21501)
DNA (1110bp) protein (370aa)
purT; phosphoribosylglycinamide formyltransferase 2 (EC:2.7.2.1)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_0
Phosphoribosylglycinamide formyltransferase 2 n=85 Tax=Escherichia coli RepID=B7NBK0_ECOLU rbh
NECEvent2014_5_8_scaffold_569_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21635..21925
DNA (291bp) protein (97aa)
Uncharacterized protein YebG n=1356 Tax=Enterobacteriaceae RepID=YEBG_ECO57
yebG; YebG protein
DNA damage-inducible protein in SOS regulon, dependent on cyclic AMP and H-NS {ECO:0000313|EMBL:EGI11478.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ent
NECEvent2014_5_8_scaffold_569_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21992..22348
DNA (357bp) protein (119aa)
Protein YebF n=1348 Tax=Enterobacteriaceae RepID=YEBF_ECO57
yebF; putative lipoprotein
Protein YebF {ECO:0000256|HAMAP-Rule:MF_01435}; Flags: Precursor;; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
NECEvent2014_5_8_scaffold_569_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22675..23334
DNA (660bp) protein (220aa)
Uncharacterized protein n=82 Tax=Escherichia coli RepID=B7NBJ7_ECOLU rbh
yebE; hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAR13337.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_8_scaffold_569_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23498..24667)
DNA (1170bp) protein (390aa)
Transposase, part of IS605 with preceding ORF n=85 Tax=Escherichia coli RepID=B7NBJ6_ECOLU rbh
transposase, part of IS605 with preceding ORF
IS605 OrfB family transposase {ECO:0000313|EMBL:EHP63328.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_5_8_scaffold_569_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24724..25149
DNA (426bp) protein (142aa)
Transposase, IS200, part of IS605 with following ORF n=107 Tax=Escherichia coli RepID=B7NBJ5_ECOLU
transposase, IS200, part of IS605 with following ORF
Uncharacterized protein {ECO:0000313|EMBL:EHP63329.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
Displaying items 1-30 of 70 in total

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