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NECEvent2014_5_8_scaffold_784

Alias: 175_008_scaffold_784

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_784_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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162..2297
DNA (2136bp) protein (712aa)
speC; ornithine decarboxylase (EC:4.1.1.17)
Ornithine decarboxylase, constitutive n=71 Tax=Escherichia coli RepID=B7N7M1_ECOLU rbh
Orn/Lys/Arg decarboxylase, major domain protein {ECO:0000313|EMBL:ESA84943.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
NECEvent2014_5_8_scaffold_784_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2346..3602)
DNA (1257bp) protein (419aa)
Nucleoside permease NupG n=885 Tax=Enterobacteriaceae RepID=NUPG_ECOLI rbh
nupG; nucleoside transporter
Nucleoside permease nupG {ECO:0000313|EMBL:ELE53657.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_5_8_scaffold_784_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3804..4883)
DNA (1080bp) protein (360aa)
Membrane-bound lytic murein transglycosylase C n=291 Tax=Enterobacteriaceae RepID=MLTC_ECO24 rbh
mltC; murein transglycosylase C
Murein transglycosylase C {ECO:0000313|EMBL:AFH12796.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_5_8_scaffold_784_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4948..5223)
DNA (276bp) protein (92aa)
Probable Fe(2+)-trafficking protein n=1284 Tax=Enterobacteriaceae RepID=FETP_ECO24
bacterial Fe(2+) trafficking protein
Probable Fe(2+)-trafficking protein {ECO:0000256|HAMAP-Rule:MF_00686, ECO:0000256|SAAS:SAAS00073862}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobac
NECEvent2014_5_8_scaffold_784_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5251..6303)
DNA (1053bp) protein (351aa)
Adenine DNA glycosylase n=87 Tax=Escherichia coli RepID=B7N7L7_ECOLU rbh
mutY; adenine DNA glycosylase
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EOV62855.1}; TaxID=1182676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_5_8_scaffold_784_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6464..7183
DNA (720bp) protein (240aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; t
tRNA (guanine-N(7)-)-methyltransferase n=737 Tax=Enterobacteriaceae RepID=TRMB_ECO24 rbh
trmI; tRNA (m7G46) methyltransferase, SAM-dependent
NECEvent2014_5_8_scaffold_784_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7183..7509
DNA (327bp) protein (109aa)
Uncharacterized protein YggL n=691 Tax=Enterobacteriaceae RepID=YGGL_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQZ99195.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_8_scaffold_784_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7693..8412
DNA (720bp) protein (240aa)
Uncharacterized protein n=83 Tax=Escherichia coli RepID=B7N7L4_ECOLU rbh
yggN; hypothetical protein rbh
PF11101 family protein {ECO:0000313|EMBL:EIH13034.1}; TaxID=869672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
NECEvent2014_5_8_scaffold_784_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8588..9634
DNA (1047bp) protein (349aa)
ansB; L-asparaginase II (EC:3.5.1.1)
Periplasmic L-asparaginase II n=85 Tax=Enterobacteriaceae RepID=B7N7L3_ECOLU rbh
L-asparaginase {ECO:0000313|EMBL:ESA84953.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 90771
NECEvent2014_5_8_scaffold_784_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9751..10728
DNA (978bp) protein (326aa)
Uncharacterized protein n=61 Tax=Escherichia coli RepID=B7N7L2_ECOLU rbh
yggM; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFJ74558.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_8_scaffold_784_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10720..12021)
DNA (1302bp) protein (434aa)
C4-dicarboxylate permease n=64 Tax=Escherichia coli RepID=B7N7L1_ECOLU rbh
ygiK; c4-dicarboxylate permease rbh
TRAP transporter, DctM subunit {ECO:0000313|EMBL:ELE41749.1}; TaxID=1182673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
NECEvent2014_5_8_scaffold_784_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12021..12524)
DNA (504bp) protein (168aa)
TRAP transporter, DctQ-like membrane protein n=61 Tax=Escherichia coli RepID=D7XC77_ECOLX rbh
putative TRAP-type C4-dicarboxylate transport system, small permease rbh
TRAP transporter, DctQ-like membrane protein {ECO:0000313|EMBL:ESA84956.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_5_8_scaffold_784_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12569..13555)
DNA (987bp) protein (329aa)
TRAP-type C4-dicarboxylate transport system n=249 Tax=Enterobacteriaceae RepID=D6I0T3_ECOLX rbh
putative c4-dicarboxylate transport system binding protein rbh
TRAP transporter solute receptor, DctP family {ECO:0000313|EMBL:EFJ72113.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_5_8_scaffold_784_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13868..14338)
DNA (471bp) protein (157aa)
Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW n=6 Tax=Escherichia coli RepID=H1BVF4_ECOLX
yggW; putative oxidoreductase, HemN family
Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW {ECO:0000313|EMBL:EOV71433.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
NECEvent2014_5_8_scaffold_784_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14295..14825)
DNA (531bp) protein (177aa)
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Escherichia coli TA280 RepID=F4V5T2_ECOLX
putative oxygen-independent coproporphyrinogen III oxidase
Radical SAM superfamily protein {ECO:0000313|EMBL:KDY96737.1}; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_5_8_scaffold_784_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14818..15411)
DNA (594bp) protein (198aa)
dITP/XTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405};; Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Non-standard pur
dITP/XTP pyrophosphatase n=82 Tax=Escherichia coli RepID=B7N7K7_ECOLU rbh
yggV; putative deoxyribonucleotide triphosphate pyrophosphatase
NECEvent2014_5_8_scaffold_784_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15419..15709)
DNA (291bp) protein (97aa)
UPF0235 protein YggU n=981 Tax=Enterobacteriaceae RepID=YGGU_ECO45
yggU; hypothetical protein
UPF0235 protein YggU {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_5_8_scaffold_784_18
Escherichia sp. KTE52, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15706..16272)
DNA (567bp) protein (189aa)
Uncharacterized protein YggT n=1349 Tax=Bacteria RepID=YGGT_ECO57 rbh
hypothetical protein
Resistance protein {ECO:0000313|EMBL:EOV47251.1}; TaxID=1182659 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KT
NECEvent2014_5_8_scaffold_784_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16290..16994)
DNA (705bp) protein (235aa)
UPF0001 protein yggS n=60 Tax=Escherichia coli RepID=D6IUV4_ECOLX rbh
yggS; hypothetical protein rbh
Putative enzyme {ECO:0000313|EMBL:CAR14466.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K
NECEvent2014_5_8_scaffold_784_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17012..17992
DNA (981bp) protein (327aa)
Transporter n=61 Tax=Escherichia coli RepID=B7N7K3_ECOLU rbh
yggR; transporter rbh
Twitching motility protein {ECO:0000313|EMBL:EFJ72119.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_5_8_scaffold_784_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18107..18523)
DNA (417bp) protein (139aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=869669 specie
Putative Holliday junction resolvase n=403 Tax=Enterobacteriaceae RepID=RUVX_ECO24
Holliday junction resolvase
NECEvent2014_5_8_scaffold_784_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18523..19158)
DNA (636bp) protein (212aa)
UPF0301 protein YqgE n=1 Tax=Escherichia coli RepID=J7Q9K5_ECOLX rbh
yqgE; hypothetical protein,hypothetical protein,Uncharacterized ACR, COG1678
UPF0301 protein YqgE {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=679206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_8_scaffold_784_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19195..20145)
DNA (951bp) protein (317aa)
glutathione synthetase (EC:6.3.2.3)
Glutathione synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; EC=6.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00162};; GSH synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; Glutathione synthase {ECO:0000256|HAMAP-Rule:
Glutathione synthetase n=822 Tax=Enterobacteriaceae RepID=GSHB_ECOLI rbh
NECEvent2014_5_8_scaffold_784_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20158..20889)
DNA (732bp) protein (244aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; En
Ribosomal RNA small subunit methyltransferase E n=9 Tax=Enterobacteriaceae RepID=C3SV73_ECOLX rbh
hypothetical protein
NECEvent2014_5_8_scaffold_784_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20969..21676)
DNA (708bp) protein (236aa)
Extracellular deoxyribonuclease {ECO:0000313|EMBL:EHV54167.1}; EC=3.1.21.1 {ECO:0000313|EMBL:EHV54167.1};; TaxID=868161 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enter
Endonuclease-1 n=641 Tax=Enterobacteriaceae RepID=END1_ECOLI rbh
endonuclease I
NECEvent2014_5_8_scaffold_784_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21771..22226)
DNA (456bp) protein (152aa)
Protein SprT n=871 Tax=Enterobacteriaceae RepID=SPRT_ECO27 rbh
hypothetical protein
Protein SprT {ECO:0000256|HAMAP-Rule:MF_00746, ECO:0000256|SAAS:SAAS00012266}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
NECEvent2014_5_8_scaffold_784_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22345..23541)
DNA (1197bp) protein (399aa)
Galactose-proton symporter n=1 Tax=Escherichia coli HVH 195 (3-7155360) RepID=T7SY97_ECOLX
D-galactose transporter GalP {ECO:0000313|EMBL:KHH09657.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
galP; galactose-proton symporter
NECEvent2014_5_8_scaffold_784_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23983..25005)
DNA (1023bp) protein (341aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
S-adenosylmethionine synthase n=1354 Tax=Enterobacteriaceae RepID=METK_ECO24
metK; methionine adenosyltransferase MetK
NECEvent2014_5_8_scaffold_784_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25800..27776
DNA (1977bp) protein (659aa)
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; TaxI
arginine decarboxylase (EC:4.1.1.19)
Biosynthetic arginine decarboxylase n=1208 Tax=Enterobacteriaceae RepID=SPEA_ECO57 rbh
NECEvent2014_5_8_scaffold_784_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27922..28653
DNA (732bp) protein (244aa)
Uncharacterized protein n=73 Tax=Escherichia coli RepID=B7N7J0_ECOLU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EFJ72103.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
Displaying 30 items

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