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NECEvent2014_5_8_scaffold_907

Alias: 175_008_scaffold_907

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_907_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..78
DNA (78bp) protein (26aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=V6FD49_ECOLX
yhfT; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGP23273.1}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_8_scaffold_907_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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90..1175
DNA (1086bp) protein (362aa)
Uncharacterized protein n=75 Tax=Escherichia coli RepID=B7NDY0_ECOLU rbh
yhfS; hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EFJ75475.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_8_scaffold_907_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1552..2811)
DNA (1260bp) protein (420aa)
cysG; siroheme synthase (EC:2.1.1.107)
Siroheme synthase n=70 Tax=Escherichia coli RepID=CYSG_ECOLU rbh
Siroheme synthase {ECO:0000256|HAMAP-Rule:MF_01646}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
NECEvent2014_5_8_scaffold_907_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2751..3245)
DNA (495bp) protein (165aa)
Putative nitrite transporter n=1 Tax=Shigella sonnei 3226-85 RepID=I6DZI8_SHISO
nirC; hypothetical protein
Putative nitrite transporter {ECO:0000313|EMBL:EHU18579.1}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_5_8_scaffold_907_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3430..3756)
DNA (327bp) protein (109aa)
nirD; nitrite reductase small subunit (EC:1.7.1.4)
Nitrite reductase [Nad(P)H] small subunit n=497 Tax=Escherichia RepID=E2QFM2_ECOLX
Nitrite reductase [NAD(P)H], small subunit {ECO:0000313|EMBL:ESA90079.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so
NECEvent2014_5_8_scaffold_907_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3753..6296)
DNA (2544bp) protein (848aa)
Nitrite reductase, large subunit, NAD(P) H-binding {ECO:0000313|EMBL:CAR14975.1}; EC=1.7.1.4 {ECO:0000313|EMBL:CAR14975.1};; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Entero
nirB; nitrite reductase, large subunit, NAD(P) H-binding (EC:1.7.1.4)
Nitrite reductase, large subunit, NAD(P) H-binding n=68 Tax=Escherichia coli RepID=B7NDX5_ECOLU rbh
NECEvent2014_5_8_scaffold_907_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6558..7739)
DNA (1182bp) protein (394aa)
Protein TsgA n=109 Tax=Escherichia coli RepID=TSGA_ECO7I rbh
tsgA; putative transporter rbh
Protein TsgA {ECO:0000256|HAMAP-Rule:MF_01044}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299
NECEvent2014_5_8_scaffold_907_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8010..8582
DNA (573bp) protein (191aa)
ppiA; peptidyl-prolyl cis-trans isomerase A (EC:5.2.1.8) rbh
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493, ECO:0000313|EMBL:CAR14973.1};; TaxID=585056 species="Bacteria; Proteobacteria; Gammaprot
Peptidyl-prolyl cis-trans isomerase n=75 Tax=Escherichia coli RepID=B7NDX3_ECOLU rbh
NECEvent2014_5_8_scaffold_907_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8844..9446
DNA (603bp) protein (201aa)
Stationary-phase protein, cell division n=76 Tax=Escherichia coli RepID=B7NDX1_ECOLU rbh
fic; cell filamentation protein Fic rbh
Toxin-antitoxin system, toxin component, Fic family {ECO:0000313|EMBL:EFJ75503.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherich
NECEvent2014_5_8_scaffold_907_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9478..10041
DNA (564bp) protein (188aa)
pabA; para-aminobenzoate synthase component II (EC:2.6.1.85) rbh
Para-aminobenzoate synthase glutamine amidotransferase component II {ECO:0000313|EMBL:EFJ75502.1}; EC=2.6.1.85 {ECO:0000313|EMBL:EFJ75502.1};; TaxID=749549 species="Bacteria; Proteobacteria; Gammaprot
Aminodeoxychorismate synthase, subunit II n=76 Tax=Escherichia coli RepID=B7NDX0_ECOLU rbh
NECEvent2014_5_8_scaffold_907_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10127..11347
DNA (1221bp) protein (407aa)
argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (EC:2.6.1.11 2.6.1.17) rbh
Acetylornithine/succinyldiaminopimelate aminotransferase n=75 Tax=Escherichia coli RepID=B7NDW9_ECOLU rbh
Acetylornithine/succinyldiaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; Short=DapATase {ECO:0000256|HAMAP-Rule:MF_01107};; Short=Suc
NECEvent2014_5_8_scaffold_907_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11414..12259)
DNA (846bp) protein (282aa)
Inner membrane protein n=1 Tax=Escherichia coli UMEA 3703-1 RepID=T9RND9_ECOLX
yhfK; hypothetical protein
Integral membrane protein, YccS/YhfK family {ECO:0000313|EMBL:ESA90070.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
NECEvent2014_5_8_scaffold_907_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12210..13331)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Escherichia coli STEC_C165-02 RepID=G1YVP8_ECOLX
yhfK; hypothetical protein
Integral membrane protein, YccS/YhfK family {ECO:0000313|EMBL:EFJ75500.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so
NECEvent2014_5_8_scaffold_907_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13382..14014)
DNA (633bp) protein (211aa)
cAMP-activated global transcriptional regulator CRP n=1397 Tax=Enterobacteriaceae RepID=CRP_ECO57 rbh
crp; cAMP-regulatory protein
Catabolite protein activator {ECO:0000313|EMBL:ESC90188.1}; TaxID=1268977 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_5_8_scaffold_907_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14316..14720
DNA (405bp) protein (135aa)
Protein YhfA n=1350 Tax=Bacteria RepID=YHFA_ECO57
hypothetical protein
Protein yhfA {ECO:0000313|EMBL:EMX17707.1}; TaxID=1116066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P030186
NECEvent2014_5_8_scaffold_907_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14775..15644)
DNA (870bp) protein (290aa)
Phosphoribulokinase {ECO:0000256|RuleBase:RU004082}; EC=2.7.1.19 {ECO:0000256|RuleBase:RU004082};; TaxID=1125638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
Probable phosphoribulokinase n=737 Tax=Enterobacteriaceae RepID=KPPR_ECOLI rbh
prkB; phosphoribulokinase
NECEvent2014_5_8_scaffold_907_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15698..15916)
DNA (219bp) protein (73aa)
UPF0270 protein YheU n=1328 Tax=Enterobacteriaceae RepID=YHEU_ECO24
hypothetical protein
UPF0270 protein YheU {ECO:0000256|HAMAP-Rule:MF_00690}; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_8_scaffold_907_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15910..16932)
DNA (1023bp) protein (341aa)
Hydrolase n=75 Tax=Escherichia coli RepID=D6IVA0_ECOLX rbh
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:CBG36440.1}; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O4
NECEvent2014_5_8_scaffold_907_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16932..18665)
DNA (1734bp) protein (578aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=M8MDH4_ECOLX
yheS; putative ABC transporter ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ72121.1}; TaxID=1444102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_5_8_scaffold_907_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18796..19347
DNA (552bp) protein (184aa)
Glutathione-regulated potassium-efflux system ancillary protein KefG n=982 Tax=Enterobacteriaceae RepID=KEFG_ECO24 rbh
kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
Glutathione-regulated potassium-efflux system ancillary protein KefG {ECO:0000256|HAMAP-Rule:MF_01415, ECO:0000256|SAAS:SAAS00009823}; Putative quinone oxidoreductase KefG {ECO:0000256|HAMAP-Rule:MF_0
NECEvent2014_5_8_scaffold_907_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19347..21152
DNA (1806bp) protein (602aa)
Glutathione-regulated potassium-efflux system protein KefB n=74 Tax=Escherichia coli RepID=KEFB_ECOLU rbh
Glutathione-regulated potassium-efflux system protein KefB {ECO:0000255|HAMAP-Rule:MF_01412}; K(+)/H(+) antiporter {ECO:0000255|HAMAP-Rule:MF_01412}; TaxID=585056 species="Bacteria; Proteobacteria; Ga
kefB; glutathione-regulated potassium-efflux system protein KefB rbh
NECEvent2014_5_8_scaffold_907_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21162..21362
DNA (201bp) protein (67aa)
Uncharacterized protein n=74 Tax=Escherichia coli RepID=B7NDV8_ECOLU
yheV; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFJ75490.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_5_8_scaffold_907_23
Escherichia fergusonii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21457..21879
DNA (423bp) protein (141aa)
slyD; FKBP-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915, ECO:0000313|EMBL:CAQ90798.1};; TaxID=585054 species="Bacteria; Proteobacteria; Gammaprot
Peptidyl-prolyl cis-trans isomerase n=3 Tax=Escherichia fergusonii RepID=B7LS55_ESCF3
NECEvent2014_5_8_scaffold_907_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21928..22146)
DNA (219bp) protein (73aa)
Protein SlyX n=78 Tax=Escherichia coli RepID=SLYX_ECOLU
slyX; hypothetical protein
Protein SlyX {ECO:0000256|HAMAP-Rule:MF_00715}; TaxID=1444102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-3
NECEvent2014_5_8_scaffold_907_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22367..23179
DNA (813bp) protein (271aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales
FKBP-type peptidyl-prolyl cis-trans isomerase FkpA n=1108 Tax=Enterobacteriaceae RepID=FKBA_ECO57 rbh
fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase
NECEvent2014_5_8_scaffold_907_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23346..24068
DNA (723bp) protein (241aa)
Uncharacterized protein YheO n=1022 Tax=Enterobacteriaceae RepID=YHEO_ECOL6 rbh
sensory box protein
YheO-like protein {ECO:0000313|EMBL:EFK53412.1}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS
NECEvent2014_5_8_scaffold_907_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24068..24454
DNA (387bp) protein (129aa)
tusD; tRNA 2-thiouridine synthesizin protein D (sulfurtransferase) (EC:2.8.1.-)
Sulfurtransferase TusD {ECO:0000256|HAMAP-Rule:MF_00390}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00390};; tRNA 2-thiouridine synthesizing protein D {ECO:0000256|HAMAP-Rule:MF_00390}; TaxID=1268998 spec
Sulfurtransferase TusD n=101 Tax=Escherichia coli RepID=TUSD_ECOLU
NECEvent2014_5_8_scaffold_907_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24454..24813
DNA (360bp) protein (120aa)
Protein TusC n=78 Tax=Escherichia coli RepID=TUSC_ECOLU
tusC; sulfur relay protein TusC
Protein TusC {ECO:0000255|HAMAP-Rule:MF_00389}; tRNA 2-thiouridine synthesizing protein C {ECO:0000255|HAMAP-Rule:MF_00389}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Entero
NECEvent2014_5_8_scaffold_907_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24821..25108
DNA (288bp) protein (96aa)
Protein TusB n=524 Tax=Enterobacteriaceae RepID=TUSB_ECO24
sulfur transfer complex subunit TusB
Protein TusB {ECO:0000256|HAMAP-Rule:MF_01564, ECO:0000256|SAAS:SAAS00012082}; tRNA 2-thiouridine synthesizing protein B {ECO:0000256|HAMAP-Rule:MF_01564}; TaxID=868134 species="Bacteria; Proteobacter
NECEvent2014_5_8_scaffold_907_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


25234..25371
DNA (138bp) protein (46aa)
30S ribosomal protein S12 n=1 Tax=Salmonella enterica subsp. enterica serovar Agona str. 57.A.08 RepID=N1GID3_SALET
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
Displaying 30 items

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